Ceratina calcarata (carpenter bee): 108628367
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Entry
108628367 CDS
T06061
Name
(RefSeq) ATP-dependent RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108628367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108628367
03012 Translation factors [BR:
ccal03012
]
108628367
Enzymes [BR:
ccal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108628367
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108628367
Translation factors [BR:
ccal03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108628367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
AAA_22
ResIII
nSTAND3
ATPase
AAA_19
PhoH
NPHP3_N
AAA_14
ABC_tran
ATPase_2
NACHT
NB-ARC
AAA_16
AAA_23
Motif
Other DBs
NCBI-GeneID:
108628367
NCBI-ProteinID:
XP_017885729
UniProt:
A0AAJ7NAG0
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MSHLFQRFSTRGMNSRRKYGEGGEASHSEGSHFVHSGRSRGRGQRHPPGLKGREIGLYYK
GKAQAKNKEMETDVIKLSPNIQRRIETVLENSKGYYNKLYRSASAQDTDDLLENKYVHIH
DSQFKRKFINIISGSIQDNLAKMLLAKSRLERNPELDTKFLNEYKQKQSYTEYENMLKFR
KKLPCYQKRSEILELIRENQVVVISGETGCGKTTQIPQFILDDQLEQGNGSVTRIICTQP
RRISAMSVAERVADERAERLGKSVGYQIRLEKVFPRDRGSILFCTTGMLLQFIQNDPALK
EFSHIVLDEIHERSTESDFILALLKLIIPKRPDLKVLLMSATLNSERFSKYYDNCPMIHI
PGFTFPVEEFYLEDILMFTQFKFPPSAPLPQDYKKHIKRFKELQHARGEFHDILDPYIRE
LIAEKKFSREVIDQLRNPNSEKMSLELIEQLIMYICKTKDAGAILVFLPGMMDIIKLRRI
MMESGRYPQSRYIIYPLHSRMPSVEQKLIFQEPPNGVRKIIIATSIAETSITIEDVVYVV
DCGKTKFSKFDVEKNIQTLEPEWVTAANAKQRRGRAGRVKPGICYHLYSKAREMTLDQYP
LPEMLRTRLEEVILKIKILQLGNATAFLASVMDPPDLKTIDLSLELLRTLNALNNEEHLT
PLGYHLAQLPLDPRTGKMLIWASLFSCVAPIFAIAASLSFKDAFYCPLGKEDQAREKKLE
LSMGQYSDHVALAEAVTRFEAAYKRGYAGSFCSEYFLSFNTLKLLSEMKGQFAQHLCEMK
FLETDNPNASNANRNSRNMTLVKAIVCAGLYPNIASVRRITKNGTQAWTPEDGKVCIHPS
SVNDKIKCPSPFLTYFTKQKSTAIYLHDTTCVTSPILLFAAPKLSITKEKARFFISLSNF
QKFICELQSAQLIQELQEQFNNLLEYKITHPGTVAWNSVEGDLINIFIDLICQKDEDMGF
TGSDMQRYH
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatctgtttcagagattttcaacacgaggaatgaattcgagacgtaaatatggt
gaaggaggagaagcctcacattctgagggttcacattttgtacatagtggtcgttcgaga
ggtagaggccagagacatccacctgggttaaaaggcagagaaataggactctattacaaa
ggcaaagcacaagccaagaacaaggaaatggaaactgatgttattaaattgtccccaaat
attcaaaggagaatagaaactgtattagaaaattctaaaggatactataataaactgtac
agaagtgcatctgcccaagatacagatgatttactggagaataaatatgtacacattcac
gattcccagtttaagagaaagttcattaacataatatctggcagcatacaagacaatctg
gcaaagatgttgttagctaaatcaagattagaaaggaatcctgagttagataccaaattc
ttaaatgaatataagcaaaagcagtcttatacagaatatgagaacatgcttaaatttcga
aagaagttgccatgctatcagaaaagatctgagatactggagttaattagggaaaatcaa
gttgtggtaataagtggagagactggttgtggaaagacgacgcagatacctcagttcata
ttggatgaccaactagaacaaggcaatggtagcgtgacacggattatttgcactcaaccc
aggaggatatcggctatgtcggttgccgagagagttgccgatgaaagagcagagaggctt
ggtaaatcagttggttaccaaatccgacttgaaaaggtatttccaagggatagaggaagt
atattattttgtactactggaatgttgctgcaatttatacaaaatgatccagctttaaaa
gaattttctcatatcgtattagacgaaatacacgaaaggtctacggagagtgacttcatc
cttgcgttattgaaactcattatccctaagcgcccagatttgaaagtgctgttaatgagc
gcaacgcttaattctgaaagattctcgaaatattacgacaattgcccgatgattcacatt
ccgggtttcacgttcccggtagaagaattttatttagaagacattttaatgttcacgcaa
ttcaaatttccgccgtcagctccgctgcctcaagattacaagaaacatattaaaaggttc
aaggaattgcaacatgcacggggcgaatttcacgacatattggatccttatatacgggaa
ctaatagccgagaagaaattttcaagggaagtgatcgatcagttgcggaatccaaacagc
gagaagatgtctctcgaacttatagaacaattaattatgtatatatgtaaaacgaaagat
gcgggagctattttagtttttcttcctggcatgatggacataataaaattacgtagaata
atgatggagagcggacggtacccacaaagtcgatacattatatatcctcttcactcccga
atgccaagcgtcgaacaaaagcttatatttcaggaaccacctaatggtgttcgtaaaata
ataatcgccacttctatagctgagacctctataactatcgaggatgtagtatacgtcgtt
gattgcgggaaaactaagtttagtaaattcgatgtcgagaaaaacattcaaactttggaa
cccgaatgggtaacggcagctaatgctaaacagcgaagaggcagagctggcagagtgaag
cctggtatttgttaccatttgtactcgaaagctagagaaatgaccctggatcagtatcca
ttgcccgaaatgctaagaacacgtttagaggaagttatattaaaaataaaaattctgcaa
ttaggaaatgcgacagctttcttagccagcgttatggatcctccagatttgaaaaccatc
gatttatctttagaattgctcagaactcttaacgcgttgaacaatgaggaacacttgact
cctttgggatatcatttagcacaattacctttggatccgagaacaggaaagatgttgata
tgggcatcgctgttttcttgcgtagcaccaatcttcgcgatcgcagctagtctcagtttt
aaagacgcgttttactgcccgctgggaaaagaggatcaagcgagggaaaagaaactcgag
cttagtatgggccaatacagcgatcacgttgcattggccgaggcagtaacgagattcgag
gctgcatataaaagaggatacgcaggctcgttttgttcagagtatttcctctcgtttaac
acgcttaaacttctttccgaaatgaagggtcaatttgcccagcatttgtgcgaaatgaaa
ttcttagaaacggacaatccgaacgccagcaacgctaataggaattccaggaatatgaca
cttgtaaaagcgatagtatgtgctggattatatcctaacattgctagtgtacggaggata
acaaaaaacggaacgcaggcgtggacgccagaagacggtaaagtgtgtatacatccgtca
agtgtaaacgataaaattaagtgtcctagtccatttttaacctattttacgaagcagaaa
tcgacagcaatatatttacacgatactacatgcgttacctcaccaattctattattcgct
gctccgaagctgtctataacaaaggaaaaagcacgctttttcatcagcttgtcaaatttt
cagaagttcatttgtgagctgcaaagtgcgcaacttattcaggagctgcaagagcagttt
aataatttattagagtacaaaataacgcatccaggaacagtggcctggaatagcgtcgaa
ggagatttaataaacatatttatagatctaatttgccaaaaagatgaggatatgggattt
accggttccgatatgcagagatatcattaa
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integrated database retrieval system
