Ceratina calcarata (carpenter bee): 108628381
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Entry
108628381 CDS
T06061
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccal03021
]
108628381
Transcription machinery [BR:
ccal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108628381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TOR1L1_N
HEAT_EZ
TPR_Trm732_C
HEAT_EF3_N
ResIII
HEAT_ECM29
HEAT_2
Motif
Other DBs
NCBI-GeneID:
108628381
NCBI-ProteinID:
XP_017885748
UniProt:
A0AAJ7J6L1
LinkDB
All DBs
Position
Unknown
AA seq
1906 aa
AA seq
DB search
MTSRLDRLFILLETGTNAVTKRAAAQQLGEAQRLHPHDLHHLLARVSTLLKSPQWDTRVS
AAQAIQTILAQVPQWDPQPIKKEENVAEAKRSQQNRLSLEDFDMEKVLAQSSHLTGSEGS
EYDLIATDGEQVANQEEKIAAKLGFHPQLMDTSELFTAEDLNNTVVPTGNCQGKLSVSET
LKQPEGLSRREMNRARRKARQSVSKQRSREPEDQHRAPQEDLHTPNPTQSPPTYTSILEF
HPKKPKLEDSPSETASLATDTQNDSTAAVPDSTGCWPDSVIDWPLESFAESLSQDLFSQK
WEIRHGSATALRELIKLHGKGAGKSRDQTPLEMEESHYEWIIDKALRLLCVLGLDRFGDF
VSDQVVAPVRETCAQALGSLLLLIPSTKQKNGGIAGIISVILKLLEHDEWEARHGALLAF
KYLLAVREDLLDEILVKVYPAIMRGLSDPVDDVGAAAASALIPVASSLPRLLKPEELEAI
IARLWELLHEQDDLAAACNSFMGLLAAILSLSTARDCLIPQPLSQVLPRLWPFLSHSSSS
VRKATLQTLETLTGDKGDEERWGEAGGIVLQEALRHVFQRILIEHVTLIQDVAERVWENL
VVKSDLGLLLHAACPLVSTWLCLAMQPENLPFNPNLLMAITNSKVNKQPQVVASSENLES
GNNNYGCKAAVAAAGVAAVSELKVYIGGIETVALGVRKSNVVQARCRAARMLGLLSYYVV
QPAPGVVYTEDIPSPSICYAKVMLAHLNSRSAMQRTVAGLTMAHWATVKGDEATAVPDIL
RKRLLECLTECVYYDEIAGFFTRLLHDSRDYVATLKHYKLPIPVKTDTSGVMTLDQITML
ASKKITELSTMGGTGTLGSPGIKLKAKAKLIEDLEERRKALEAAAAETANQQSFYNVTST
AALAGAATMLKCLPASPEPLNPLVKPLMEAVKREENEELQKLAAKHLSYLVDLCVDRKPS
PNAKISTNLCTFLCSDIEFTPRVNFSAEPDLFDGILTLGNRQKHAERVAYNRGTNSGLGG
GRGPGRPPTTEIPLEELLACEEPEAKAARTRRRGATFALTAIAGLFGASLTARLPHLWDM
MLPSLLLDESKIAVQLSRENKNNPGNSTSSEEEEVNQLIFGLQVLETMAPSLDKALLPPV
LESLVPLCKLLAHPYKAVRHMASRCIAVLASLNTEKVIVQVIQSVIPLLEATGADKLSFS
SSSTFANIAAPSELDSVRQGAAEALACLVEGLGVNIVPYAVLFMVPLLGRMSDQNQAVRL
ACSATFATLVQLLPLDPGAITDPPNLIEKKAQERRFMEQLLNPRSIPDTELPIPVAAELR
SYQRQGLNWLNFLNVYRLHGVLCDDMGLGKTLQTLCILALDHHRNPHVPPSLVVCPPTLT
GHWVYEAEKFFEAKNLSVLQYAGTPPEREKLRPRVTYHRLIVASYDIVRKDIDYFERRQW
NYCVLDEGHVIKNGKTKSAKATKRLHANHRLILSGTPVQNDVLELWSLFDFLMPGFLGTE
KQFAAKYSRPILACREPKAGPKEQEAGALAMEALHRQVLPFLLRRNKEDVLQDLPPKITQ
DYYCDLSQLQKMLYEDFRSRHSASLLSGDASGNDPHGGHVFEALRYLRNVCNHPKLVLSQ
KHPLYETICVNLKQQKSTLGEIEHGAKLPALKQLLLDCGIGQPQQQQPHQPRNSTTADIS
STQQQQLVSPHRALIFCQLKAMLDIVEKDLLRVHLPTVTYLRLDGGIPATQRHSVVARFN
ADPSIDVLLLTTQVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRL
ITRSTVEEKIMGLQKFKLLTANTVISTDNASLETMATDQLLDLFSLENNKEKRKEEDRKV
NLVPGFNRSVLDMLPELWEQQQYDDEYNFDSFLSTLKATENQQIMN
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccagattagatagattgttcatattactcgagactggaacgaacgctgtgact
aagagagctgcggcacagcagttaggtgaagcacagcgtctgcaccctcacgatttgcat
cacctcttagctcgagtctctaccctgttgaaatcgcctcaatgggacacaagggtctcc
gccgctcaggcgattcaaacgatacttgcccaagtccctcagtgggatcctcagccgatt
aagaaggaagagaacgtcgccgaggcgaaaagaagtcaacagaatcgactgagtctcgag
gacttcgatatggagaaagtgttagctcagagttcgcatttgaccgggtcggagggtagc
gaatatgacctgatcgctaccgatggggaacaggtggctaatcaggaagaaaaaatcgct
gccaagttggggttccatcctcagttgatggacacatcggaattgtttactgccgaggat
ttgaataacacggttgttccaacaggaaattgtcaggggaagttgtcggtcagcgagacc
ctgaagcagcctgaaggacttagtaggagggagatgaacagagctaggcgcaaggcgcgt
cagtcggtatccaagcaacgttcccgggagccagaagaccagcaccgcgcccctcaagaa
gatctccataccccgaaccccacgcaatctcctccgacgtacacgtctatcctggagttc
cacccgaagaaaccaaaactcgaggactccccctctgaaaccgcgagtctcgccacggac
acccaaaacgattcgacggcagcggttcccgatagtacaggttgctggccggactccgtg
atcgactggcctctggaatcgttcgctgagagtctgagccaagacctcttcagtcagaaa
tgggagatccgccatggttccgccaccgctttacgagaactaataaaactccacgggaaa
ggcgccgggaaatcgcgcgaccaaacgcccttggaaatggaggagagtcactacgaatgg
ataatcgataaggctctacgtttactctgcgtcttaggtttagatagattcggagacttc
gtttcggaccaggtggtcgcgccggtccgggaaacctgcgcccaagctcttggctctctg
ctcctgttaatcccaagtactaaacagaaaaacggtgggatcgccggaatcatctcggtc
atattaaaattgctcgagcacgacgaatgggaggcgaggcacggggcactcctcgctttt
aaatacttgttagcagtccgcgaggatctgctcgatgaaatcttagtcaaagtatatcca
gcgatcatgagaggcctgtcggaccctgtggatgacgtaggcgcagctgcggctagtgct
ctcatccctgtagcctcgagtctacctcgtttattgaagcccgaagaattagaagcgatc
atcgcgagactttgggaattgctgcacgaacaggacgatcttgcagctgcttgtaatagt
ttcatgggtctgctggctgcgatattgtccctgtcgactgctagagattgtttgatccct
cagcctttgtcgcaggttttacccaggctctggcctttcttaagtcactctagctcgagc
gtgcgaaaagcaacgttacagactttagagactttgactggggacaagggtgacgaggag
agatggggcgaagccgggggcatcgtccttcaagaagctttgcgacatgtttttcaaaga
attcttatagaacacgtgacgcttattcaggatgttgctgagagagtttgggagaatctg
gtggttaagagtgacctgggtctgttgttgcacgcggcttgccctctggtcagcacgtgg
ctctgtctagccatgcaaccggagaacttaccgttcaatccgaatcttctgatggccatc
acgaattcgaaagttaataaacaaccgcaggtcgtcgcgagttcggagaacttggaaagt
gggaataataattacggatgtaaggcggcggtggcagcggcgggagtggcagcagtctcg
gagttgaaggtttatatcgggggaatcgagacagtcgctttgggcgtgaggaaaagcaac
gttgttcaggcgagatgtagagctgcgaggatgctgggattgttgagttattacgtggtg
cagccggcgcccggcgtggtttacaccgaggatatccccagcccgtcgatttgctacgcg
aaggtgatgctggcgcatttaaattcgaggtccgcgatgcagaggacggtggctgggctt
actatggcgcattgggcaactgtgaaaggggacgaggccacagcggtaccagatatatta
agaaaaagattattggagtgtctgacagaatgtgtgtactacgacgagatcgccggcttc
ttcacgcgtttgctccacgacagtcgcgattatgtagcaacattgaaacactacaagctt
ccaatccctgtgaaaaccgatacgtcgggcgtgatgactctcgatcaaataacgatgctg
gctagtaagaagataactgagctttcgacgatgggaggaaccggaactctgggcagcccc
gggatcaagctgaaggccaaggcgaaattaatagaagatttagaagagaggaggaaagct
ctcgaagccgcggcggctgaaacggctaatcaacaatcgttttataacgtgacttcgact
gccgctttggccggtgctgcgacgatgctcaagtgcctcccggcttcgcccgagcctttg
aatcctttggtgaagccgctgatggaagctgttaagagagaggagaacgaggagctgcaa
aaacttgccgctaagcatttgtcttatttggtcgacctttgcgtcgataggaaaccttca
cccaacgctaagatatctacgaatttgtgtacattcctttgctccgacattgagttcact
ccgcgcgtgaatttctccgccgagccggacctcttcgacggtatcctgaccctcggcaat
cggcagaagcacgcggagagagttgcttataacagaggcactaatagtggactcggcgga
ggtcgaggaccggggcgaccaccgacgactgaaattcctttagaagaattgctggcgtgc
gaggaacctgaagccaaggctgctaggaccagaaggagaggtgcgaccttcgcgctcact
gctatagctggtctgttcggcgcgagcctcaccgctcgactgcctcacttatgggacatg
atgctgcccagtttgttgttggatgagtcgaaaatcgcggtacaattgtcccgcgagaat
aagaataacccaggaaatagcaccagcagcgaagaggaggaagtaaatcaattaatattc
ggtttacaagtattagagacgatggcaccgagcctcgataaagctctgctacctcccgtc
ctagaatcccttgtaccactgtgcaaactgttggctcacccgtacaaagcggtaagacac
atggcctcacgctgcattgccgttctcgcgtctctcaacaccgaaaaggtgatagttcaa
gtgattcaaagcgtgatccctctgttggaagcgactggagccgacaaactgtccttctcc
tcctcctccaccttcgcgaacattgcggctccgagcgaactggattcggtaaggcaaggc
gcggccgaggcattggcttgtctggtcgaaggcctcggcgttaacatcgtaccttacgcg
gtcctcttcatggtccccttgctgggacgcatgagcgatcagaatcaagcggtcagactg
gcctgcagtgcgacttttgcgactctcgtccagttattgccgttggaccccggggccatc
actgacccgccgaatttgatagaaaagaaggcccaagaacgtcggttcatggagcagttg
ctaaatcccaggagcatcccggacactgagctaccgatcccagtggccgcggagttgcgc
tcgtatcaacgccaaggattgaactggttgaacttcttgaacgtttaccggctgcatgga
gttctctgcgacgacatgggcctagggaaaaccttgcagaccctctgtatcctagcttta
gaccatcaccgtaaccctcacgtaccgcccagcctagtagtgtgtccgccgacgttgacc
ggccactgggtgtacgaggcggagaagttcttcgaggcgaaaaacctctcggtgctgcag
tacgcggggacgccacccgaacgagagaaactgaggccgagggtcacgtatcacagactg
atcgtggctagttacgatatagtaaggaaggatatcgactactttgagaggagacagtgg
aactattgcgtgctagacgaggggcatgtgataaaaaatgggaagacgaagagtgccaag
gcaactaagaggctccacgcgaatcacaggctgatactatctggaactccggtgcagaac
gacgtgctggaactgtggtccctcttcgattttctgatgccaggcttcctgggcaccgag
aaacaattcgcagcgaaatactcgaggcctatcctggcttgcagggaaccgaaagcaggg
cctaaggaacaggaggcgggagctctggctatggaagccctccacagacaggttttgccg
tttttactcagacgaaacaaggaggacgtgctgcaggacttgccaccgaagataacgcag
gactattactgtgatctctctcaattgcaaaagatgctttacgaggacttccgcagcagg
cattcggccagtctgttgtccggagacgcctcgggcaacgatccgcacggtggacatgtg
ttcgaggcacttaggtacctcaggaacgtttgcaatcatccaaaattagtactgagtcag
aaacatccgttatacgaaacgatctgcgtcaatctgaaacaacagaagagcaccctaggc
gagatcgagcacggcgctaagctgccagccctgaagcagctcctccttgattgcggcatc
ggtcagccccagcaacagcagccgcatcaaccgagaaactcgacaaccgccgacatctct
tccacgcaacagcaacagctggtgagcccccaccgagctctgatcttctgtcaactgaag
gcgatgttggacatcgtggagaaagatctgttacgcgttcacctaccaacggtcacttat
ctgaggctcgacgggggcattccggcgactcagaggcattcagtggtcgccagattcaac
gcggatccttcgatcgatgttctattgctcacgactcaggttggcggattgggattgaac
ttgaccggtgccgacaccgtgatcttcgtcgagcacgactggaatcccatgaaggacctc
caagcgatggacagggcgcacaggatcggccagaagaaagttgtcaacgtttatagattg
atcacgaggtccacggtcgaagagaagatcatgggactgcagaaattcaaattgctcacc
gcaaacaccgtcatttcgaccgacaacgcctcactggagacgatggccaccgatcagttg
ttagatttattttccttggagaataacaaagagaagaggaaagaggaggacaggaaagtg
aacctcgtgcctgggttcaacaggtcggtactggacatgctgcccgaactatgggaacag
cagcagtacgacgacgagtacaatttcgattcgttcttgtctactttgaaggcgacggag
aatcaacagatcatgaattag
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integrated database retrieval system
