Ceratina calcarata (carpenter bee): 108628436
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Entry
108628436 CDS
T06061
Name
(RefSeq) homeobox protein caupolican-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccal03000
]
108628436
Transcription factors [BR:
ccal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108628436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
108628436
NCBI-ProteinID:
XP_017885834
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MSQFSFRGSPNLQCPVTVSSSLTSSSASPVSGSILSAGGSSLVSAAAGTTTVNHPLAGLS
NARMAVTSAVVRPPGSPTTSVSPSQGHPPPTTGGPTPTGRCCDTGRPIFTDPLTGQTVCS
CQYELLGGYQRLGALPTAALSMYSAPYAAAAAAAAASEGMYFPSLGAEQAPFYTPAGGLD
LKENVAVGATAAWPYPSVYHPYDAAFASYPFNGYGMDLNGARRKNATRETTSTLKAWLNE
HKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWEPRNRVEDEDNNNED
DDSGRKSVDEKDRLDSKDSGTGSSEDGERPAHRMDLLGTSGGSAGVQGRTESEWSESRAD
SGPDSPECLYDQREPRHPLQLQHPAYLASSHGRLLRHPSPESTPPSSHHLPASTTASSTG
SGVTTKPRIWSLADMASKDGEQQSPTPTTMAGLSSPYGGSGGAGGGVAGGGGGGGGKLVS
PLASRLPPHYPLHPAMHSGAQFVRHHPDFYRNLYGASHLGSGDMSLLETYSRTLGGLSGV
MPPSTAPSILTSSSSTVSASGNVKPFTINGGTGAPGGPGVLLTTATSGLSPSSSSTASSG
GSGESPHPSGSLPSTQELKSPGRV
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagttctcttttcgaggatcaccaaatctacagtgtcctgtgacagtgagctcg
tcgctgacgtcgtcttcggcctcgccggtgtccggttcgatcctaagcgcgggcggttcg
tcgctggtcagcgcagcagcgggcaccaccactgtcaatcatcccttagccggtttgtcg
aacgcaaggatggcggtgactagcgcagtggtcaggccgccgggtagcccgacgacgtcg
gtaagcccgtctcagggtcacccaccgcctacaactggcggcccgacgccgaccggacgg
tgttgcgataccggaagaccgatcttcacggatccgctcacgggccagacggtctgctcc
tgccagtacgagctcctcggcggttaccaacgactcggcgcgctaccgacggctgccctc
tcgatgtacagcgcgccgtacgccgcggcagccgccgctgccgccgcctccgagggcatg
tatttcccgagcctcggagctgaacaggcacccttctacacgccggctggtggcctcgat
ttaaaggaaaatgttgccgttggagccacggctgcgtggccttacccatccgtctaccac
ccttacgacgccgccttcgccagttaccccttcaatggttatggcatggatctgaacggt
gccagacggaaaaacgcgacacgagagacgacgagcacgctcaaggcctggttgaacgag
cacaagaagaatccgtatccgacgaagggcgagaaaattatgctggccatcatcacgaag
atgactctgacccaagtgtccacgtggttcgcgaacgcgcggagacgactgaagaaagag
aacaagatgacgtgggaaccgaggaacagggtcgaggatgaggataacaacaacgaggac
gatgacagcggaaggaagagcgtcgacgagaaggaccggctagattcaaaggactcgggc
accgggtcgagcgaagacggagagcgaccggcccaccggatggaccttctgggcactagc
ggtgggtccgcgggtgttcaaggtagaaccgagagcgagtggagcgaatcgcgagcagac
agtggtccagatagtccggagtgcctctacgatcagagagagcccaggcatcctctgcag
ctccagcatccggcgtacctcgcttcctctcacggccgtttgttacgtcatccgtcaccc
gaaagtacgccacccagcagtcaccacttacccgcgtcgaccactgcgtcgtcgacaggc
agcggagtcaccacgaagccgcggatctggtccttggccgacatggcgagtaaggacggc
gagcagcagagtccgacgccgacgacaatggctggtctctcgtctccttacggtggtagc
ggcggggcaggtggaggagtcgctggaggtggcggcggcggaggtggaaagttggtgagt
cctttggccagtcgattaccaccccattaccccctgcacccggcgatgcactcgggagcg
cagttcgtccggcatcatccggatttctatcgaaatctgtacggcgcgtctcacctcggg
tccggcgacatgtccctactggagacgtattcgaggacgttgggcggactgagcggcgtg
atgccgccatccacggcgcccagtatactaacgtcttcctcttcgaccgtctcagcgagc
ggtaacgttaaacctttcacgattaacggcggtaccggtgctcccggtggacccggcgtg
cttttgaccaccgccacctccggtttgtctccttcttcctcgtcgacggcgtcttccggt
gggtccggtgagtcgccccatccgagcggaagcttgccgtccacgcaggagctcaaatca
cccggcagggtgtga
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