Ceratina calcarata (carpenter bee): 108628607
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Entry
108628607 CDS
T06061
Name
(RefSeq) probable histone-binding protein Caf1
KO
K10752
histone-binding protein RBBP4
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03082
ATP-dependent chromatin remodeling
ccal03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108628607
03083 Polycomb repressive complex
108628607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccal03036
]
108628607
Chromosome and associated proteins [BR:
ccal03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
108628607
Histone modification proteins
HAT complexes
HATB complex
108628607
HDAC complexes
Sin3A-HDAC complex
108628607
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
108628607
PRC2.2
108628607
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
108628607
Heterochromatin formation proteins
Other heterochromatin formation proteins
108628607
Chromatin remodeling factors
NuRD complex
108628607
NuRF complex
108628607
NuRF complex (fruit fly)
108628607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
YqbF
Motif
Other DBs
NCBI-GeneID:
108628607
NCBI-ProteinID:
XP_017886149
UniProt:
A0AAJ7J6T8
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MGDKDGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGK
DYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECQPDLRLRGHQKE
GYGLSWNPNLNGYLLSASDDHTICLWDINAPPKENRVIDAKTIFTGHTAVVEDVAWHLLH
ESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSSEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPAS
ELEAGGS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggtgataaagacggtgagacttttgacgatgcagtggaggaaagggttatcaatgaa
gaatacaagatatggaaaaaaaatactcctttcttgtacgatctggtcatgactcatgcc
ttggaatggccatcattaacagctcagtggctaccagacgtaactaggccagaaggaaag
gattattctgtacatcgcctgattctaggcactcacacttcagatgagcaaaatcatcta
cttatcgctagcgtacaattaccaaacgaggatgcgcagttcgatgcatcgcactatgat
aatgaaaaaggagaattcggaggctttggttcagtcagcggaaagatagaaatcgaaata
aaaataaatcatgaaggagaggtgaacagagcgcgatatatgccacagaatccatgcgtg
attgcaaccaaaacaccgtccagtgatgttcttgtattcgattacactaaacatcccagt
aaaccagatcccaatggggaatgtcaaccagatctgagattacgaggacaccagaaggag
ggatatggactatcatggaatccaaacttaaacggatatttgcttagtgcatctgacgat
catacaatttgtttatgggatatcaatgcaccacctaaagaaaatcgtgtgatagatgcg
aaaactatcttcactggacatactgctgttgtcgaggatgtagcttggcatttattgcat
gaatctttattcggatccgtcgcggatgatcagaagttaatgatctgggacacgagatgt
aacaacactagcaaaccaagtcatacggtcgatgctcatactgctgaagtgaactgttta
agtttcaacccatattccgaatttattctggcgactggtagcgcggacaagacggtagcg
ctttgggatttgaggaatcttaaattgaaattacattcatttgagtcccacaaagacgag
atcttccaagttcaatggtcacctcataacgagacgattttagctagtagcggtacagac
aggcgtctacacgtgtgggatcttagtaaaataggagaggaacaatccagcgaagatgcg
gaggatggaccacccgaattactgtttatacatgggggtcatactgcgaagattagtgat
ttctcgtggaatccaaacgaaccctgggtgatatgttcagtatcagaagacaatataatg
caggtctggcaaatggcggaaaacatctacaacgacgaagaaccggacacaccagccagc
gagttagaagctggaggttcataa
DBGET
integrated database retrieval system
