Ceratina calcarata (carpenter bee): 108628929
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Entry
108628929 CDS
T06061
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108628929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccal03041
]
108628929
Spliceosome [BR:
ccal03041
]
Complex B
Other components
Prp19-related factors
108628929
Complex C
108628929
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
RRM_YTH1
zf-CCCH_2
zf-CCCH
Nup35_RRM_2
zf-CCCH_4
zf-CCCH_3
zf-CCCH_10
RRM_3
zf-CCCH_12
RRM_PARP14_3
zf-CCCH_PARP12
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
108628929
NCBI-ProteinID:
XP_017886651
UniProt:
A0AAJ7NB77
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MATSKTTNTYNRQNWEDAEFPILCQTCLGDNPYIRMTKERYGKECKICMRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALKIKDDLPRSDVNKEYYVQN
IDSEIGKIDPTSPAGAVGKSAAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLMRRAAAMPKLDPPEDKSITTLYVGNLG
DVLTEKQLRDHFYQYGEIRSVTMVPRQQCAFIQYTQRSAAEAAAERTFNKLILGGRRLTI
KWGRSQGRQTISAAEATREILEPVPGLPGALPPPPESMGNNFFNLQTTPGMMPPMMIPPP
PVAPQFMFPPQMAAATATPIFPPGTAPIHYPSQDPSRMGASQGIGKPWPEE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggctacttcgaaaacaacaaacacatacaacagacaaaactgggaagacgctgaattc
ccgatattatgtcagacttgcttaggtgacaatccctatattcgtatgacgaaggagaga
tacggaaaggagtgtaaaatatgtatgcggccattcaccgtgtttagatggtgtcctggc
gcaaggatgagattcaagaagacggaggtctgtcagacgtgcagccgtttaaagaacgtc
tgccagacctgtttgttagacttggagtatggtttacccattcaagtgagagacgcggca
ctcaagatcaaagacgatttacccagatcagacgtgaacaaagaatactacgttcagaac
atagacagtgaaatcgggaagatagatccaacctcgcctgcaggtgctgttgggaagtcc
gcagcagccagtgacctgctgatgaagctggcaaggaccagtccttattacaaacggaac
agacctcacatctgttcattctgggtgaaaggagaatgcaaaagaggagaggaatgtccg
tatcggcatgagaaaccgacggatcccgatgacccgttagcggatcaaaatatcaaagac
cgttattacggtgttaacgaccctgttgcggacaaactgatgcgcagagctgcggccatg
cccaagttagacccgccggaagacaaatctatcacgaccttatacgttggaaacttgggc
gacgttttaacggagaaacagctgcgcgatcatttctaccagtacggagaaatacgatcg
gtgaccatggtccctcgtcagcaatgtgccttcatccagtacacgcaaagaagcgctgcg
gaagccgcagcagagaggacgttcaacaagctgatactgggaggtcgaagactgacgatt
aagtggggacgttcgcaaggaaggcaaacgatatctgcggcagaagcgaccagagagatc
ctagaaccggtaccaggcttgcccggggctttaccaccaccgccggagagtatgggaaac
aattttttcaatctgcaaactaccccgggcatgatgccgccgatgatgattccacctccg
cccgttgctccgcaatttatgttccctcctcaaatggcagccgcaaccgcaaccccgatc
ttcccacctggaaccgctccgatacattatccgagccaggatccatcgagaatgggcgcg
tctcagggcatagggaagccttggcccgaggaataa
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