Ceratina calcarata (carpenter bee): 108628994
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Entry
108628994 CDS
T06061
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108628994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccal03000
]
108628994
Transcription factors [BR:
ccal03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
108628994
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
108628994
NCBI-ProteinID:
XP_026672712
UniProt:
A0AAJ7WDX1
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MGQSDDLEDSIYNRHQDLCQKLNMDATAASEAWKSYETIRQNYTLEGDQLHWIGCALYVA
CRKSSIPTVGKTGTNVEGNCVSLTRLLQLCNLPLIHFFTKSKSWADMANMPQDFRSKIEK
LEANFAVSMVIFRKYQPIFTDIFKDPADDVSRPPRSRRHKAMPCTPARVFEFCWTLFVCV
KGAFPDISDDLVNSYHLLLVCCDLIYGNALLANRKDLLNPNFSGLPTNFNDEDYTPPQTA
NCIVSLLCERHEAIAVEAKVIKEYYLKNHIDKLFNERVLRGDQSNFSGILEALNFDGNNK
AVNRVYEQHVLSVGDFDERIFLADWRRIRLNGISSLEVVGGDLACHAKLSKHISLRGHDA
SNNIGSPTQMMNVGDLHEQFQIKREQYSGQIQHLAPTTPLTGRSYLRPQKDITNVTPVST
ATQSVIRLQAMLAGQTSSSESLLKILNGCSQDVKTFVETKVKELGELFCASYNKSSNVNE
TSSDFGRKRLYLGQTLFYRLLETILNDEKGKKPNYDVTNLLTQEIFIQCLFACCLEIVIY
SYKSNDKVFPWILNALNLAAYHFYKVIEIIVRAEDQLSRDVVKHLNQIEEKILESLAWQS
DSPLWAAIESTSRGVPSCEEVSLPGMLDTVDPNVPGQPVLRRIALDRGTHHDVQQSPISS
ASERFQSPVASSLAKKRLFPDARVGGQSILRVTGQSVLPASKLLTIDGNSKILLVPEQIT
VPRSSGSIQAASTPLQTVTVNREAVKSKRTGSVALFFRKFYILASVRMLDLCGSLEIMDT
DLKKKIWTIFEYSIKERTELMKDRHLDQILMCAIYVICKLAKMEKNSFTEIMRCYRLQPQ
AESHIYRSVLIAKTSSSGETTQSSNEETPRETSEQETKPAPPTPTNMAGTSQNFGEETRG
DLIKFYNTVYVPQVKEVANKLGLARGSVMNLSLSPLPKGKPPASSPVRRVTSSIMTRTLD
PKAISASPAPQLSYCFSRSPAKDLEAINKMMISVDPKKSVGKRLLADETDVEMSEGPSPI
KKTTVIARKMDIIIGERRTQNH
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgggacagtcggacgacctggaagactctatttataatcggcaccaagatctgtgtcaa
aaattgaatatggatgcgaccgccgcatccgaagcctggaaatcttacgagactattcga
caaaattacactctggagggtgaccagttgcattggatagggtgtgcattgtacgtagcc
tgccgcaaatcgtctattcctactgttggaaaaaccggcactaacgtggaaggcaattgc
gtttcgctcacacgtctattacaattgtgcaatctaccgttgatacatttcttcacgaag
agtaagtcttgggcggacatggccaacatgccgcaagattttcggtccaagatagagaag
ctcgaggcgaacttcgctgtatccatggttatattcagaaagtatcagccaattttcacg
gacatattcaaagacccggcggatgatgtttcgagaccgccgagatctcgaaggcacaag
gcgatgccttgcactcccgcgagagtgttcgagttctgctggacgttgttcgtctgcgta
aaaggagcgttcccagatatctccgatgatctggtcaattcttatcacctcctcttggtc
tgttgcgatcttatatatggcaacgctctgctggccaacaggaaagatctcttaaatcct
aatttctctggtttgccgacgaattttaacgatgaagattacactccgcctcaaacggcg
aactgtatagtcagtctgttgtgtgaacgtcacgaagcaatcgcggtcgaagctaaagta
attaaggagtattatctgaagaatcatatcgacaagctgttcaacgagagagtgttgcgt
ggggaccagtcgaacttctctggtattctggaagctttgaatttcgatggcaacaacaag
gccgtcaacagagtttatgaacaacacgtgctcagtgtcggagatttcgatgagaggatt
ttcttagctgattggagaagaataagattgaacggaatatcgagcttggaagtagttggc
ggggacctagcttgccacgctaaattgtctaaacatatttcgctgagaggccacgatgcc
agtaataacatcggctctcccacgcaaatgatgaacgtcggcgatcttcacgagcaattt
caaataaagagagaacagtacagcgggcaaattcaacatttagcgccaaccacgccgttg
accggacgcagttacctcagacctcagaaagatattaccaacgtgacgccggtgtccacc
gcgacgcagagcgtgatccgccttcaggcgatgctggcgggccagacgtcgtccagcgag
agtctgttgaaaattctgaacggttgttcccaggacgtgaaaacgttcgtcgagacgaag
gtgaaagagctcggagaattgttctgcgccagttacaataagagctcgaacgtgaacgag
acgagctcggatttcgggaggaagaggctttacctcggccagacccttttctacagactc
ttagaaacgatattgaacgacgagaaagggaagaaaccgaactacgacgtaacgaatcta
ttgacgcaggagatcttcatccagtgtttgttcgcgtgctgtctagaaatcgttatttac
tcgtacaaaagtaacgacaaggtcttcccgtggattttgaacgctctcaatttggccgct
tatcatttctacaaagtgatagagatcatcgtcagagcggaggaccagctctcgcgcgac
gtcgtcaagcatttgaatcagatagaagaaaagatcttggagtcactcgcgtggcagagc
gacagtccgttgtgggccgcgatcgagtccacgtccaggggtgtccccagctgcgaggaa
gtctctttgcccgggatgctggacaccgtcgatccgaacgtcccggggcagccagtgttg
agaagaatcgctttggatcgtggcactcatcacgacgtgcaacaaagtcccatctcttct
gcatcggaaagattccagtcccccgttgcgtcttccttggccaagaaacgtctgttcccc
gacgcccgagtcggcggccagagcatcctgcgagtgaccggtcagagcgttctaccagcg
tcgaagctgctgaccatcgacggtaactcgaagatacttctggtgccggagcagatcacg
gttcccagatcgtccggctccatacaggccgcgtcgactcctttgcaaaccgtgacggtc
aaccgggaagcggtaaagtcgaagcgaaccggttccgtcgcgctcttcttcagaaagttc
tacatcctggccagcgtacgcatgctggacctgtgcggatcgttggagatcatggacacc
gatttgaagaagaagatatggacgatcttcgagtattcgatcaaagagagaacggagctg
atgaaggatcgtcatctcgatcagattttgatgtgtgcaatttacgtgatatgcaaactg
gcgaagatggagaagaactcgttcaccgagataatgcgatgttaccgattgcaaccgcag
gcggagtcgcacatttacagatcggtacttatagcgaaaacgtcgtcgtccggcgagacg
acgcagagcagcaacgaggagacaccgagggagacgtcggaacaggaaacgaaaccggca
cctccgacgcccacgaacatggctggaacgtcgcagaatttcggcgaagagacgcgcggc
gatttgatcaagttctataacacggtctacgtgccgcaggtgaaagaggtggcgaataaa
ttgggactggcccgcgggagtgtgatgaatctctcgttgagtcctctgccgaaggggaaa
ccacccgcgagttcgccggtgagacgggtcaccagtagtatcatgacccgtacgctggac
ccgaaggccatctcggcttcgccggcgccgcagctcagctactgtttcagtcgtagtcca
gccaaggatttggaggccattaataagatgatgatctccgtggatccgaagaagtccgtt
ggcaagcgacttttagccgacgaaaccgacgtggagatgtccgagggaccgtcaccgatt
aaaaagacgaccgtgattgcgcgcaaaatggatattataattggtgaacggcgcacacag
aatcactaa
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