Ceratina calcarata (carpenter bee): 108629904
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Entry
108629904 CDS
T06061
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccal03009
]
108629904
Ribosome biogenesis [BR:
ccal03009
]
Eukaryotic type
90S particles
Other 90S particles
108629904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
HAT_Syf1_CNRKL1_C
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
S1
HAT_PRP39_C
TPR_14
TPR_19
OB_RRP5_4th
ARM_TT21_N
ARM_TT21
HAT_Syf1_M
TPR_15
ARM_TT21_5th
TPR_6
TPR_16
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
108629904
NCBI-ProteinID:
XP_017888354
UniProt:
A0AAJ7JA28
LinkDB
All DBs
Position
Unknown
AA seq
1369 aa
AA seq
DB search
MTLKSFPRGGKKVPEKKFHAEKHDKRQREKAGGKKRNEEEEANFISTTAERLTYATISEG
LTVLGCVFDVTEYDLMISLPGGTIGRAQVTDISETYTNLLQNLIESGEQQTGEFKSLTEL
YSVGDYVVCYVKAIRPEEKFQIVLSLEPKLINQSIDISHLDVGSRMVCTVSSIEDHGCVI
DTGLTNARGFIPNKENEKNLFPGKQLLCCVKEMKTSENTSIITLSSKQGLVKAVHETDIK
SLDSLMPGTRFDLRIKKVLANGVHVSFGEDSIGYVNQLYLEEPLYTYGKGMNITGTLLYI
LPTIKFAYFSCMLDKPRDDSIKPGDMIEEAVTLFKESGGVVLQLNKNKTRGFLPLKRANV
DYEKIMEKFIPGSTHKCRILAYVWMDRTYVCTMQHSLLEEKYFKIADFQPGDTVKAKIVS
INQENGIVNVQIGKFGGQVSPENVSDEGLTALKKLKVGAEVQARVLFVNTAWKKVYLTLK
KSMINSNLPILSDVREAKIGSRYHGTVIQTHKSGLLIKFYGNAKGWVPRREEDSSNYSIG
QTVLVKIESIDKESGKMLLSIGSKRKKEEEEEVKKEEKKEFEIGDEVEGTIVESSTLGVQ
LKISKNYGQNVSVGFLPAGHMSPCMETAALLASKCIPGETLTAVVFTTEPLIFTKTLFPQ
GKHRFFEKLKVGNCIPCSIRDVEPNGVRVILPVAGCAPFGYVNYSNVSNFHLLNTNQILY
AKIMSINEKEKQLGLTLSLKKVFDALPDPKSRLMAAVDPLKLYLSKLKELASNSFYENRP
ISSVKLGQRVTGKIEKVTDSGLVVQLPNNLLGIISKDHYRGQKKVGDNISGTIMWKNYVH
ELVDITALPALMNKISVNQNKPIQFDKGKELRGRILMVTNWFVLILIKGAGKGTLVAMPV
RRHMNDVQPDLRPYNVDAKIKCYIVLNSKESDVMPICMVKSAFEKKNQKNKDADNVVASK
KRKNATQETEVPTKKIKTEDKEKMGVKKKRSKKKSDSADSTCIKNNNFQIEEEDVKPTET
ELRKSEEEKPRVPECGFFWDDTPDLNLLGKKESSSESEDETEQQPKQKKKKLNAAERREE
ARQKEREIREREEALASNQLPNSVDQFDRLVLGSPNSSIIWLQYMAYHLQTTEIEKARAV
ARRAVKTINFREENERLNVWNAWLNLESKFGTPESLNDVFQEAVRTNDSLKIYTHMLTVH
IEAGRLSELAKTVNTMIGKFKQNPQVWIDCGEALLKVNLKDKSRHIMQRALQSLPPSEHV
NLMARFALLENRFQDKERAQTLFEQILSSYPKRVDVWCCYVDCLVKTNDIDLARKVLERA
VVQTLPPRKMKTLFKKFIAFEEQYGTQEDVSRVQQMAVEYVEKQCNRDC
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgacactgaaaagctttccacgaggagggaagaaagtcccggagaagaaattccatgcg
gagaagcatgataaaagacagcgcgagaaagctggagggaaaaaaagaaatgaggaagag
gaagcgaattttatttctacgaccgccgagaggttaacgtatgcaacgatatccgaagga
ctgacagtgttaggatgcgtgttcgatgttaccgagtacgatttaatgatatccttgcct
ggtggcacgatcggtcgtgctcaggtcacagatatcagcgagacttacacgaatttgtta
caaaatctgatcgagtccggagagcagcagacaggcgagttcaaatctttaacagaattg
tattccgtcggggactacgttgtgtgttacgtgaaagccatacggccagaggagaagttt
cagattgtactttctctagaaccaaaattgataaatcaaagtatagatatcagtcattta
gatgttggctcgaggatggtctgcaccgtcagcagcatagaagatcacggctgtgtgatc
gatacaggattaacgaacgcgaggggatttattcctaacaaggaaaatgagaagaatttg
ttccctggcaaacagcttctgtgctgtgtgaaagaaatgaaaacgagcgagaacacatca
ataatcacattgtcttctaaacaaggccttgtcaaagctgtccacgaaacagatattaaa
tcgttggacagtttaatgccaggcacgaggtttgatcttcggattaagaaagttctagcc
aacggtgtacacgtttcctttggagaagattcaataggctacgtaaaccaactatactta
gaagagccgttgtatacgtatggaaaaggaatgaatatcacaggaacgttactgtatatt
ctacccacaattaaattcgcgtacttcagctgcatgttagacaaaccgcgagacgattcg
attaaacccggagacatgatcgaggaagctgttacattgttcaaagaatccggcggcgtg
gtgttgcagttgaataaaaacaaaacacgaggtttccttcccttaaaaagagcgaatgtc
gactacgagaagataatggagaaatttattcctggctctacgcacaagtgcagaatactg
gcttacgtttggatggacagaacttacgtctgtacaatgcagcactcgttgttggaagag
aagtattttaaaattgcagattttcaaccgggggacacggtgaaagcaaagatagtgagt
ataaatcaggagaatggtatagtcaatgtgcaaatcggtaaattcggtggtcaagtttca
ccggagaacgtgtctgacgaaggtttgaccgctctgaagaaactgaaagtcggtgccgag
gtgcaagcacgagtcttgttcgtgaacactgcctggaagaaagtctacctcactttaaag
aagtctatgataaacagcaaccttcctattctgtccgatgtaagagaagcgaaaatcgga
tcgagatatcacggaactgtaatccagacgcacaaaagtggattgttgataaaattttac
ggcaatgcaaaaggttgggttccgcggcgagaagaagacagctcgaattattccattggg
caaactgtcttagtaaagatcgagtcaatagacaaagaatccgggaaaatgctgttgagc
attggatctaaacgaaagaaagaggaagaggaggaagtcaaaaaagaagagaagaaagag
ttcgaaatcggtgacgaggtggaaggaacgatagtcgaatcctctactctgggcgtacag
ctgaagatcagtaagaattatggacagaacgtgagcgtaggattcctgccggctggtcat
atgtcgccctgcatggagactgcagctctgttggcatcaaaatgcatccccggggaaaca
ttgactgctgtagtgttcaccacggagcctttaatattcactaaaactttattcccccaa
gggaaacacagattcttcgaaaaactaaaagtcgggaactgtataccttgctcgataaga
gacgtcgagcctaacggcgtgagagtcatccttcctgtcgcaggatgcgcgccatttgga
tacgtcaactacagcaacgtcagcaattttcatctcttgaatacgaaccaaattctgtac
gcgaagattatgtcgatcaatgaaaaggagaagcaattaggcttgacattgtcgttaaaa
aaagtattcgacgcgctgcccgatccaaagagcaggcttatggctgcggtggaccctttg
aaattatacttgagcaaactaaaagaactggcttcgaattcgttttatgagaacagaccg
atctcgtctgttaaattgggacaaagagtcactggaaagattgaaaaagttacagacagc
ggcttggtagtacaactgccgaacaatttgttaggcataatatctaaagatcattaccgt
ggacaaaaaaaagttggtgataatatttctggcacgattatgtggaagaattatgtccac
gagctggtcgatataactgcgctgcctgctttgatgaacaaaataagcgtaaaccaaaat
aagccgatacaatttgacaaaggaaaagagcttcgaggtagaatcttgatggtgacgaat
tggttcgtcttaattttgataaaaggtgccggcaaaggcactctggtagcgatgcctgta
aggcgacacatgaacgacgtacagccagatctgagaccttacaatgtggatgctaagatc
aaatgctacatcgtgttaaactctaaggaatcagacgttatgccaatctgtatggtgaag
tctgcttttgagaagaaaaatcaaaagaataaagatgccgataatgtggtcgcttcaaag
aagagaaagaatgctacccaagagaccgaggtacctactaagaagataaaaaccgaggat
aaagagaaaatgggagttaagaagaaacgaagcaagaaaaaatctgactctgccgattcg
acttgtattaagaacaataattttcaaattgaagaagaagacgtgaagcccacagaaact
gagttaaggaaatcagaagaagagaagccgagggtaccggaatgcggtttcttctgggac
gacacacccgatttaaatctcctcggtaaaaaggaatcctcgagcgagagtgaagacgag
acggagcaacaaccaaaacagaagaagaaaaaattgaacgccgccgaacgtcgagaggaa
gcgaggcaaaaagaacgggagattcgtgaaagagaagaagccctagccagtaatcaatta
ccaaactccgtggatcaattcgacagattggttctgggcagcccaaacagttctataatt
tggctacaatacatggcgtaccatttacaaacgacagagatcgaaaaagcgagagcagtc
gcgaggagagctgtaaaaacaattaatttcagagaagaaaacgagaggctgaatgtatgg
aacgcatggttgaacttggaatcgaagttcggaacccctgaatcgttgaacgacgttttc
caagaagccgttagaaccaacgattctttaaaaatatatacccacatgttaactgtacat
atagaagctggtagattaagtgaattagcaaaaacagtcaatactatgataggaaaattc
aaacagaatcctcaggtatggatagactgcggcgaggctttgttaaaggtgaacttaaag
gataaatcgaggcacattatgcaaagagcgttgcaatctttgccgccatctgaacatgta
aatttaatggcgaggttcgcgctgctggagaacaggtttcaggacaaagagagagcgcag
actttgttcgagcaaattttaagctcgtacccgaagcgggtcgatgtctggtgttgctac
gttgattgtttagtgaaaactaacgatatcgatctagctagaaaagtgttggaacgagct
gttgttcagacgctcccgcctaggaaaatgaagacgctgttcaaaaagtttatcgctttc
gaggagcagtacggaacgcaagaagacgtttcccgcgtgcaacagatggctgtagaatat
gtagaaaaacagtgcaacagagattgttga
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integrated database retrieval system
