Ceratina calcarata (carpenter bee): 108629959
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Entry
108629959 CDS
T06061
Name
(RefSeq) nuclear factor NF-kappa-B p110 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal04620
Toll-like receptor signaling pathway
ccal04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108629959
04624 Toll and Imd signaling pathway
108629959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccal03000
]
108629959
Transcription factors [BR:
ccal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
108629959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
RHD_DNA_bind
RHD_dimer
Ank_3
Ank_4
Ank_5
Ank_KRIT1
Death
Motif
Other DBs
NCBI-GeneID:
108629959
NCBI-ProteinID:
XP_017888455
UniProt:
A0AAJ7JA32
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MSKNDWLTVRISRGEKPNIRSQASASENQDLFPYRYELQTMNDSGAYSPHTGSQGAPSAA
SPMSAMFSSIQNADLLLEGITFEVPYLTILDQPSEKFRFRYKSEMVGTHGSLMGSNSNNN
RSKSAPTVKLNNYSESAIIRCTLFTSDEELRIPHAHRLIRRVGGVDYDDPHIEISSENDH
IATFNGMAIIHTAKKNVKDEIIRKLQRQFLEERRKQNPNATLNIRDTAEIKTKAESYHKF
VNLNSVALCFEAFISDGNGIMSRIADPVYSNTINNLKSALTGELKICRINKLTSSVEGQE
EIFMLVEKVGKKNIKIKFFELNSENNEIWSAYGTFSELDVHHQYAIVFRTPAYRDLNITS
PRKVYIQLERPSDGDISEPLQFTYKPSDRIMGRKRPRISYSGSLELPHKQPSTDISRENI
LDSMNSEELKKLLSVGVSSSISEDVLAGIDLNGYLQFFDADEGQLTADSSTASQHKDDTM
FARNILMDIVQYMKLDSKNAGEHIQKLLNDRTTYGDTPLHAALRYGQHDIVKYLLLLICD
KDCKGLLNLQNSSGKTPLHFAILQNQPEVAKALLMLGADPNRPDEYGFSPLHMAAKIPDA
GVCVDTLLSKEGINIEAHNDVGWSPLHLAAEAGSYNAVRSLVRAGANVNSTDMSYGRTAL
HIAVEGGHKDIVEFLLKKTDISVNKKNFSGNTALHTAVVHPGTRAKELCELLIQHGADPR
IQNHDRESNDEEKTKDSLVNVKIEVDSDDENTEVTGQSSFDLAMNKPDILQLLNRQTDDN
TNQICMVTTKLELKDESMNINWLNTEHKEKLALILDKSEGWKRLAKHLNLDYLLKTFQPS
FASPSSLLLNYIDVQGSLSISEMEAILREIGEEEATNYIRSISFMYS
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatgattggttaacagtaagaatttcacgcggggaaaaacctaacatccga
agccaagccagtgcctccgaaaatcaggaccttttcccttacagatatgagttacagaca
atgaatgactcgggtgcttatagtcctcacacaggatctcagggtgcaccgagtgctgct
tcacctatgtcagcaatgttttcgtcaatccaaaatgctgacttgttgttagaaggaata
acatttgaagttccatatctgacgatattggatcagccgtcagaaaaatttagattccga
tataaatcggaaatggttgggactcatggaagtttaatgggttctaacagtaacaacaat
cgaagtaaatcggcaccaacagtcaaattgaacaattattctgaatccgcaataatacga
tgtacattgtttacgtctgacgaagagctaaggattccacatgctcatagattaattcgt
cgagttggtggtgtagactatgacgatcctcacattgaaatatcatctgagaatgatcat
attgcgacgtttaatggaatggccattatacacacagcgaaaaagaacgtgaaagatgaa
atcataagaaaattacagagacagtttctggaggagcgtagaaaacaaaatccaaatgcg
actcttaatatcagggatacagcagaaatcaaaaccaaagctgagtcttatcacaagttc
gtgaatttaaatagtgttgcactatgcttcgaagcatttatttcggatggaaacggaata
atgagccgaatcgcagaccctgtgtattcaaatactattaacaatctcaaaagcgcattg
accggagagctgaaaatttgcagaataaataaactaacgagcagtgtagaaggacaggaa
gaaatatttatgctcgtagaaaaagttgggaaaaagaatattaaaataaagtttttcgaa
ttaaattcggagaacaacgaaatttggagtgcatatggtacattttcagaactagacgta
catcatcaatacgcgatagtatttcggacacctgcatatagggatcttaatatcacttca
ccacgaaaagtttatatccagttagaacgaccatctgacggagatatttctgaacctctc
caatttacttacaaaccaagtgacaggataatgggcaggaagcggccacgaatatcgtat
tctggcagtttggagttaccacacaaacaaccaagcactgatattagcagggagaatata
ctggacagtatgaatagcgaagaattaaaaaaactattgtccgtaggtgttagctcttca
ataagtgaggatgttctagcaggtatagatcttaatggctacttgcaatttttcgatgca
gatgaaggccagctgacggctgatagttcaacagcctcacagcataaagatgacacaatg
tttgctagaaatatacttatggacattgtacagtatatgaaactggattccaaaaatgca
ggagagcatattcagaaactgctcaatgataggacgacatatggcgacaccccactgcat
gcagcacttcgatatggccaacacgatatcgtcaaatatcttttactgttaatatgtgac
aaggattgcaagggtcttttaaatctacaaaacagttctggaaaaacaccattacacttt
gcaatcttacaaaatcaacctgaagttgcgaaagcactacttatgctcggtgcggatcca
aatcgaccagatgaatatggattttctccattacatatggcagcgaaaattccagacgct
ggcgtctgtgttgacacgctgttgtcgaaagaaggtatcaacattgaagcacataacgat
gtggggtggtccccattacatctggcagctgaagcaggatcgtataatgcagtacgttca
cttgttcgtgcaggagcaaatgtgaatagtaccgacatgtcttacggtcgaacagcgtta
catatagctgttgagggtggacacaaagacattgtcgaatttctactcaaaaagacggac
atatccgtaaataagaaaaacttcagcggtaacaccgctttgcataccgcagttgtccat
ccaggaacacgtgcaaaagaattatgcgaattactaattcaacatggggcagacccacgt
attcaaaaccatgatcgagaatcgaacgatgaagagaaaacgaaagattcattggttaat
gttaaaattgaagttgattcagatgatgagaatacggaagttacgggacagtcatcattt
gacttggctatgaataaaccagacattttacagctgcttaatagacagaccgatgataat
acaaatcagatatgtatggttacaacaaaattggaattgaaagatgagagtatgaacata
aattggctaaatactgagcataaagaaaagttggctcttattttagataaatcggaaggg
tggaaaaggctggcaaaacatttaaatctcgactatttattgaaaacatttcagcctagt
ttcgcaagtccatcttcgctgcttttgaattacattgacgtacagggatccttatctatc
tcggagatggaggctatattacgggagattggagaagaagaagcaacaaattatattcgt
tcaatttcatttatgtattcgtaa
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