Ceratina calcarata (carpenter bee): 108629960
Help
Entry
108629960 CDS
T06061
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccal03009
]
108629960
Enzymes [BR:
ccal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108629960
Ribosome biogenesis [BR:
ccal03009
]
Eukaryotic type
Pre-60S particles
Helicases
108629960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108629960
NCBI-ProteinID:
XP_017888460
UniProt:
A0AAJ7JAX3
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MKDTKIVGFDDPEEVSDNEEENEITNIKKKVCKKSGGFQSMALSFPVLKGILRRGYKIPT
PIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEKLKTRQAKTGARALILSPTRELAL
QTLKFLKELGKFTGLKAAVILGGDSMENQFSVIHGNPDILVATPGRFLHICIEMDLQLNN
IEYVVFDEADRLFEMGFGEQINEITNRLPESRQTLLFSATLPKLLVEFAKAGLTDPVLLR
LDVESKIPEQLKLSFITCRPEEKLAVLLCLLKNVIKDDSQTVVFAATMHHVEYIHQILDK
AGISNTFIYSNLDPSARKINAAKFQNGKARVLVVTDVAARGLDIPHLDYVINFNFPAKSK
LFVHRVGRCARAGRAGTAYNIISPDEYAYLLDLHLFLGRSLCIVPPSGSTESTDGVIGKM
PQAMIEEELSELINWHNCSTDLQNMEQVCDNGYKQYIRSRPAASSESIKRVKELHINEAG
VIPEYSDVTSTTTKLLSKIVNYRPHGTIFEIGSKASCTDYQVMKKKRTLHKENIIHFHRK
VDELESKKNDMIKESVRRILPSSTDDEINAAFNTVVFPKKRNLDDLYKPPKKKKRSMTQD
KEFFIPYSAPDRHTEEGLAVNSFNTEAEKVQMDLTADNEESQRLQTQIKKWDRKKKKMVT
LNNEQKAKKIRTESGVWIPASYKSNRYSTWKEKSKVDAASDDDSEGESTKVQKLQTTANT
HWARHNKKIKEKLKKNNELKRPEQVLKARKLLDRRRKKNGRKSRKSQKNGGRKR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacacaaaaatcgtgggttttgatgatccggaagaagtgagcgataatgaggag
gaaaatgaaatcaccaatattaagaagaaagtatgtaagaaatcaggaggatttcaatca
atggctcttagtttccctgtattaaaaggaattttaagacgtggatacaagataccaact
cctatacaaagaaaaacaataccattggctttagaaggccgtgatatagtagctatggct
aggacaggcagtggaaaaacagcttgctttttaattcctttatttgaaaagcttaaaaca
aggcaagcaaaaactggtgcaagagcattaatcttatcacctaccagagaactggcatta
cagacattgaaatttctaaaagaattaggcaaatttactggcttaaaagcggctgtaatt
cttggaggtgatagtatggaaaatcagttcagtgtaattcatggaaatcctgatatatta
gtagcaacaccaggccgatttttacatatatgcatagaaatggatctacaattaaataat
atagaatacgtagtttttgatgaagctgatagattatttgaaatgggttttggagaacag
atcaatgagattacgaacagattaccagaatctagacaaacgttattattttcggcgaca
ttacctaagctcctagtcgagtttgcaaaagccggattaactgatcctgttctattgcga
ttagatgtagaaagcaaaataccggaacagttgaaactttcgttcataacatgccgacca
gaagaaaaattggcagtattgctatgtttgttgaaaaatgttattaaggatgattctcaa
acggtcgtatttgctgcgacgatgcatcatgttgaatatattcatcaaatattggataaa
gcggggatttccaatacgtttatttattccaatttggatccatcagctcgaaaaataaat
gccgctaaatttcaaaacggtaaagctcgagttctggtggtcacagatgttgccgcacga
ggtttggatattccacacctggattacgtaataaacttcaactttccggcaaaatcgaag
ctttttgtgcatagagtaggtcgttgtgcacgagcaggtcgtgctggaacagcatataac
atcataagcccagatgaatatgcttacttattagatttacatctttttcttggacgttca
ttatgcattgtaccaccttccggatctacagaaagtacggatggtgtcattggtaaaatg
ccacaagcaatgatagaggaggaactgagcgagttaataaattggcataattgttccact
gatctccaaaatatggaacaagtttgtgataatggatataaacaatacatccgatcacga
cctgcagcttcgtcggagagtatcaagagagtaaaggaattacatattaatgaagcggga
gtaataccagaatactctgatgttacttcgactacaacaaaattattatcaaaaatagta
aattaccgacctcatggtacgatttttgaaattggatcaaaagcatcatgtacggattat
caagtaatgaagaaaaaacgtacgctacataaagaaaatattattcattttcatagaaaa
gtagatgaattagagtcaaaaaagaatgatatgattaaagagtcagtgaggagaattctt
ccatcgagtacagatgatgagattaacgcagcgttcaatacagttgtgtttcccaaaaaa
agaaatcttgatgatttgtataaacctcctaaaaagaagaaacggtcgatgacacaagac
aaagaattttttattccctactctgcccctgataggcatacggaggaaggtttagcagtt
aattcctttaacacggaagcggaaaaggtacaaatggacctgactgccgacaacgaagaa
tctcaacgacttcaaacacagatcaaaaagtgggatcgcaagaagaaaaaaatggtcact
ttaaataatgagcagaaagctaaaaaaatacgaacggaatccggagtttggatacccgcg
tcttataaatcgaaccgttattcgacgtggaaggagaagagcaaagttgatgctgcgagt
gacgatgacagcgaaggagaatctacaaaagtgcagaagctgcaaacaacggcaaataca
cattgggcacggcataataaaaagataaaagagaaacttaaaaagaataatgaactgaag
cggccagaacaagtattgaaggcacgtaagttgcttgatcgtagacgcaagaaaaatggt
agaaagagtcgcaagagtcaaaagaatggtggaagaaaacgttag
DBGET
integrated database retrieval system
