Ceratina calcarata (carpenter bee): 108629976
Help
Entry
108629976 CDS
T06061
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccal03009
]
108629976
Enzymes [BR:
ccal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108629976
Ribosome biogenesis [BR:
ccal03009
]
Eukaryotic type
90S particles
Helicases
108629976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
108629976
NCBI-ProteinID:
XP_017888498
UniProt:
A0AAJ7NCJ5
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MSNKKKVKPFYPKKKKIPETKIISELQSKYDAIDETKITKFADLPLSSKTLKGLAENDYV
EMTDIQRQSIGLALRGNDILGAAKTGSGKTLAFLIPVLEILYCKQWTRLDGLGALIITPT
RELAYQIYETLRKVGKHHDTSAGLIIGGKDLKFERKRVNQCNVIICTPGRLLQHMDENPL
FDCVNMQILVLDEADRCLDMGFEQTMNSIIENLPSERQTLLFSATQTKSIRDLARLSLKD
PVYVSVHEHATHTTPEALQQSYIVCALEDKMSMLWSFIRNHLKQKIIVFLSSCKQVKYVY
EVFCRLRPGVSLYALYGTLHQLRRMEIYETFCKKQCAVLFATDIAARGLDFPAVNWVVQM
DCPEDVNAYIHRAGRTARFQRGGESLLVLLPSEEKMIEKLQERKVPISMIQINPKKLLSP
QRKMEALLARDVSLKESAQRAFIAYIKSVFLMRDKEVFNVRALNTDAFSRSLGLAIPPRI
RFLQRIDQKQRQSSNKNLEKRQIVTNTESKNDENEQRNIINYNHSSDEENEEEIASQTAI
SNDFVADDSDDDDILTVKRKNINLDDISVTVNDKENESVNKKKVVTKTAVAKKILRKKIV
PNKKITFNEEGEELLNPAKVKVSKLAKEYENEESSGINIEIAKQVLREEDKFDKQRFKEK
VKEKHREEKRKLKAIDKKKAIDEDDQDEIEDTADEYNSDSESSGPDLSWLPDPDKIYGER
QENDETSNASDISKSADESEEVGEIHRPPKRKLITQKEYKKKKKQKTFSVIDDTNLKADE
ELALQLLQH
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaagaagaaagtaaaaccattttatccgaaaaaaaagaaaatacctgaaaca
aaaataatatcggaactacagtccaagtatgatgcgattgatgaaacgaaaatcacaaaa
tttgcagaccttcctctgtcgtcaaaaactttgaaaggtctggcagaaaatgattatgtt
gaaatgacagatatccaaaggcaaagtattggattagcattaagaggcaatgacatttta
ggagcagcaaaaactggcagtgggaagaccctagcatttcttattccagttttagagata
ttatattgcaaacaatggacaagattagatggacttggcgcattaattattacgccaacc
agggaacttgcttatcaaatatatgaaactctacgtaaagtcggcaagcatcatgatact
tctgctggtcttattattggtggaaaggatttaaaatttgagagaaaacgagtgaatcag
tgtaacgttattatatgtactcctggacgtttgttacaacacatggatgaaaatccatta
tttgattgtgtaaatatgcagatattagtactggacgaagctgacagatgtttagacatg
ggtttcgagcaaacaatgaattctattattgagaatctaccatcggaacgacagactctt
ttattttctgcaacgcagacgaaatctataagagatttagccagattaagtttgaaagat
cccgtgtacgtatctgtacatgaacacgccacacatactacacctgaggcacttcagcaa
agttacattgtttgcgccttagaagataaaatgtctatgttatggtcatttatacgaaat
cacttaaagcaaaagattattgtatttctttcaagttgtaaacaggtcaaatatgtgtat
gaggtattttgtcgtttacgacctggcgtgagcttatatgcactttatggtactttgcat
caacttagaagaatggagatttatgagacgttttgcaagaaacaatgtgcagttttattt
gccacggatattgctgctcgtggattagattttcctgctgtaaactgggttgtacaaatg
gactgccccgaagatgtaaacgcgtatatacaccgggcgggtagaacagccagatttcaa
cgaggcggtgaatctttattagtcttactaccttctgaagagaaaatgattgagaaattg
caggaacgaaaagttccaatatccatgatacaaattaatccaaagaaattgctatctcca
caacgtaaaatggaagcactattggcaagagatgtttcattaaaggagagtgcacaaaga
gcatttatagcatacattaaatctgtgtttttaatgagagacaaagaagttttcaatgtt
cgtgcattaaatactgatgcattttcaagatctttaggcttagctatacccccaaggatt
cgattccttcaaagaatagatcaaaaacaacggcaatcaagtaataaaaatttagaaaaa
aggcagattgttacaaacactgaatcaaagaatgatgaaaatgaacaaagaaatattatt
aattataatcacagtagcgatgaggaaaacgaagaagaaattgcatctcaaacagcaatt
tcgaatgattttgtagctgatgatagtgatgatgatgatatattaactgtaaaaagaaaa
aacataaatttggatgatatatcagttactgttaatgacaaggagaacgaaagtgtaaat
aagaagaaagtagttacaaaaaccgcagtagctaaaaagatcctccgaaaaaagatagta
ccaaacaaaaaaattacttttaatgaggagggtgaggaattattgaatcctgccaaagtt
aaagtctcgaaattagccaaagaatacgagaatgaagagagttctggaattaatatagaa
atagctaaacaggtgttacgtgaagaagataagtttgataagcaacgctttaaagaaaaa
gtaaaggaaaaacatagagaagagaaacgaaaattaaaagctattgacaagaagaaggct
attgatgaagacgatcaagatgaaattgaggatactgcagatgaatataatagcgatagc
gaatccagtggaccagatttatcttggttaccagatccagataaaatttacggtgaacga
caagaaaatgatgaaacatcgaacgcttccgatatatcaaaaagtgcagacgaaagcgaa
gaagtcggcgaaatacatagaccacctaaacgaaaactgataacgcaaaaggaatacaaa
aagaagaaaaagcaaaaaacattttccgtgatagatgatacaaatctaaaagcagacgag
gaactagcattgcaacttttacaacattag
DBGET
integrated database retrieval system
