Ceratina calcarata (carpenter bee): 108630223
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Entry
108630223 CDS
T06061
Name
(RefSeq) protein SMG9
KO
K18735
protein SMG9
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108630223
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
108630223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
DUF6498
MMR_HSR1
ABC_tran
Ploopntkinase3
RsgA_GTPase
Prok_Ub
Motif
Other DBs
NCBI-GeneID:
108630223
NCBI-ProteinID:
XP_017888871
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MNVQKMMPIALKDSEAKDGDSRGTIKVMDRPTFILKTREGENRAVSPSQRNGANKKETDT
ATNAPSKIQDPVRMMLPSCLEMTSCLKFMDENMQLCESSLEYLYDQQDFLVVGCLGSQGV
GKSTIMSLLTSNFAPGIFPAQETSHYESGANCTTGIDFFVTKNRVIYLDTQPILSGSTID
HSATYEQKKSTTDFVNTETNLELQSLQFAAFLFSVCHVIIFVQDWFVDPNLIRFLQTAEM
LKPSSTSNMDQDYVEYYPHIVFLHNKAELQDLTPHSMEKVKEFYSKVFSSSRLQTHSGLD
MSNHSMETGLNLFFIPRIASEEESPMRQNEKKLIEKLKIKIHGINKNPMTPSSLTEKNWY
HYVSRVMEAIKKSHLSSEYGRLMP
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtacaaaagatgatgccaatcgcattgaaagattcggaagctaaggacggtgat
agcagaggtacgatcaaagttatggataggccaacgtttatattgaaaactagagaaggc
gagaacagagcagtatcaccgagtcaacgtaacggtgctaacaaaaaagagaccgataca
gctaccaatgccccgtcaaagatacaggatcccgttcgtatgatgttgccgtcgtgcctc
gaaatgacgagctgcctgaaattcatggacgaaaatatgcaactctgcgaaagctctctg
gaatatttgtacgaccaacaggacttcttggtcgtgggatgcttgggcagtcagggggtc
ggaaagtccactataatgtctttattaacgtccaattttgcgccaggtatattcccggct
caggagacgtcccattacgagagcggtgcaaattgcaccactggtatcgacttcttcgtt
acgaaaaatcgtgtaatatatttggacacgcagcccatactctctggttcgacgatagat
cactcagcgacgtacgaacagaaaaaatcgacgacggacttcgtgaatacagagaccaac
ctggagttgcagtctctgcagttcgcagcttttctgttctcggtttgccatgtgattatt
tttgtacaagattggttcgtcgatcctaatctgatcagatttctgcagactgcagaaatg
ttaaaaccgtcctcgaccagtaacatggatcaagactacgttgagtattacccgcatatc
gtgtttctgcacaataaagctgagctgcaagaccttactcctcacagtatggagaaggtg
aaggaattctatagcaaagtattttccagttctagattgcagactcatagtggtttagac
atgagtaatcattcgatggaaacaggattgaatttgttttttattcctcgcatcgcgagc
gaagaggaatcgccgatgcgtcagaacgaaaaaaaactaatagagaagttaaaaataaag
atacacgggatcaacaaaaatccaatgacaccgtccagtttgacagaaaaaaattggtac
cattacgtttcgagagtgatggaagcgatcaagaaaagtcatctgtcctccgagtatgga
agactgatgccgtaa
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