Ceratina calcarata (carpenter bee): 108630232
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Entry
108630232 CDS
T06061
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccal03009
]
108630232
Enzymes [BR:
ccal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
108630232
Ribosome biogenesis [BR:
ccal03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108630232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
GCD14
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
108630232
NCBI-ProteinID:
XP_017888895
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MGRKAKFDGTVAPSKKKGGKKAKKQGEPTFPKGVLVKEEKQLSHRQKQRAKKRLLKKQNL
NEKLKKLQKTKDVEDVMNENNVKVVSKKSKKKKKPVENGSSDNDDTEMQLDSEEEILEEQ
KDSKMKLLESETEDEDVENDKEYDSDESEQSEEMDNEETDQDKEENSDVDDGDNLLPIEK
ANKRLKRKQEKEQKLAEEEMHDMTLQQCVFTFPTKEELADMTNLKDVQQRIKDVVMILSD
FKRLRDEKRSRSEYMNLLRQDLCTYYSYNNFLMERLMQIFPLDELMEFLEASEVQRPMTL
RTNTLKTRRRDLAEALINRGVNLDPIGKWTKVGLVVYSSQVPMGATPEYLAGHYILQGAS
SFLPVMALEPKENERILDMCAAPGGKSSHIAALMKNTGVLFSNDVNEDRIKAVVGNFHRL
GIVNSVICTYDGRKIPSVIKGFDRVLLDAPCTGTGVVSKDPSVKTNKDEIDIQRCCTLQR
DLLLAAIDCTNARSESGGIIVYSTCSVLPEENECVVNYALKKRDVKLVPTGLEFGAEGFT
SYRQYRYHPSLKLTKRFYPHVHNMDGFFVAKLKKFSNIVHKKKDTDDELID
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgggacggaaagcgaaatttgacgggacagttgctccgagtaagaaaaaaggaggaaag
aaagctaagaagcagggagaacctacgtttccaaagggagtattagtgaaggaggagaaa
caattgagccacaggcagaagcaacgtgctaagaagaggctgttaaagaaacagaatcta
aatgaaaaattgaagaagttacaaaagacaaaggatgtagaagatgttatgaatgaaaat
aatgtaaaagttgtttcgaagaagtcgaagaagaaaaagaaaccggttgaaaatggatct
tcagacaatgatgacactgagatgcagttggacagtgaagaggaaattttggaagaacag
aaggattcgaaaatgaaattgctcgaaagtgaaacagaggatgaagatgttgaaaatgac
aaggaatatgattccgatgagtctgaacaaagtgaggaaatggacaatgaggagactgat
caagataaagaggagaatagtgacgtggacgacggagacaatttgctaccgatagaaaag
gcgaataaaagattgaagaggaaacaggagaaagaacaaaagttggcggaggaggaaatg
cacgatatgactttgcagcaatgcgttttcacgtttccaaccaaggaagaactcgcagac
atgactaatttaaaagatgtgcaacaacgaataaaggacgtagtcatgatattatctgat
ttcaaaagattgcgtgatgagaagaggtcacgttcggaatacatgaatctacttagacag
gatttatgcacgtactacagttacaataatttcttgatggagagattgatgcaaatattt
ccattagacgagctgatggaatttctagaagccagtgaagttcagcgacctatgacacta
cggacgaacacattgaaaacgcgtcgtcgagatttagcagaggctttaattaataggggt
gtcaatttagatcctatcggtaaatggacaaaagttgggctagtggtttattcgtcgcaa
gtacctatgggcgcgactcccgagtatttagcgggacattacattctgcaaggtgcatct
agcttcttaccggttatggctctggagccgaaagaaaacgaaagaattctggacatgtgc
gccgcgcctggcggaaagtcgtcgcatatcgcggcgttgatgaaaaacacgggagtactt
ttctccaacgacgtaaacgaagacaggataaaggcagtcgtcgggaattttcacagactc
ggaattgtgaattccgtgatctgtacttatgacggacggaagataccatcggtgatcaaa
ggtttcgatagagtgttattagatgcaccgtgcacgggcaccggcgtcgtttcgaaggat
ccgagcgtcaaaacaaataaagacgagatagacatacagcgttgctgcacgttgcaaagg
gatttgcttttagcagctatcgattgtacgaacgcgcgatcggaatctggcggtatcatc
gtttattctacgtgttcagttttgccggaagagaacgaatgcgtcgtcaattatgccctt
aagaaacgggacgttaaactagtgccgaccggcctggaattcggggccgaaggttttacg
agctacagacagtacagataccatccatcgttgaaactcacgaaacgattttaccctcac
gtacacaatatggacggattctttgtggcgaaattaaaaaagttctcgaatattgttcac
aagaagaaagacacagacgacgaacttatcgattaa
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