Ceratina calcarata (carpenter bee): 108630612
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Entry
108630612 CDS
T06061
Name
(RefSeq) DNA repair and recombination protein RAD54-like isoform X3
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108630612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccal03400
]
108630612
DNA repair and recombination proteins [BR:
ccal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
108630612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Dus
Helicase_C
HDA2-3
ResIII
Rad54_N
Motif
Other DBs
NCBI-GeneID:
108630612
NCBI-ProteinID:
XP_017889474
UniProt:
A0AAJ7JBF4
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MKMSVDVVEMLKEPRMIKVCAPMVRYSKLQFRTLVRRYNCDVCFTPMILADSFVRSEKAR
ENEFSTNDEDKPLIVQFAAKNVNDFLNAAEMVAPYCNGVDLNCGCPQRWALKEGYGADLL
KKPDLVKDLICRIRSLAPSQRGKRPLFPDLMSNNVAAKDIEPPVRQTVKRACGRNTMDVR
IPECKAVVLSADGVQATQQVISEHEERVKKLLSRPFKIPIPGYQLSGRTLGIRLSGPRRA
LHDPDEANALVVYSPPEMSEHEKLKLDPSKLLVHVVVDPLLCNILRPHQREGVMFMYECV
TGKRIENAYGCIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIDKAIIVAPSSLVKNWQN
EIFKWLNNKVQPLAIDGGNKADIDRKLTGFMKTYGRRCVNPVLIISYETFRLHAHVLHQD
DVGLVLCDEGHRLKNSENQTYQALINLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLG
TAQEFRKKFEIPILRGQDASATDDERKIAQERLSELVTVVNKCLIRRTSALLSKYLPLKH
ELVVCIKMTKLQTDLYKNFIQSDSVRKSMLSDNSENTKRGKTLSALSAITLLKKLCNHPD
LVYDKIMEKSEGFEKAAELLPPNYNTREILPELSGKVMVLDCLLASIKTTTTDKIVLVSN
YTQTLDLFEKLCQKRCYNYVRLDGSMTIKKRSKVVDKFNDPTSNDFIFMLSSKAGGCGLN
LIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGTIEEKIFQRQAHKKAL
SSTVVDQEEDVARHFTLNDLRDLFKLEENTVSDTHAKFKCRRCVNGGEVKGPSEQSDCNS
DLSDWRHAHNPRNLPDIPLRHCWSSGISFVFHHRSHEQVKTDNNSSRGESSVPQFDRTG
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtcagtcgacgtagtagaaatgttgaaagaaccaaggatgataaaagtatgt
gccccaatggttagatacagcaaactacagttcaggactctggtgagaagatacaattgt
gacgtctgttttacacccatgatcttggccgactcgttcgtacgatctgaaaaagctaga
gagaacgagttctcgaccaacgacgaggacaaaccgctgattgtacaatttgctgctaaa
aatgtgaacgattttttgaacgcagcagagatggtcgctccatattgcaacggagtcgat
ctgaactgcggttgccctcaacggtgggcattgaaagaaggctacggagctgatctgctt
aaaaagccggatcttgtcaaggatctgatatgtcggattcgatctttggctcctagtcaa
agaggcaaacggccactttttcccgatctaatgtccaacaatgtagcagcgaaagatatc
gaaccaccagttcgtcaaacggttaaaagggcttgcggtcgtaacacgatggatgtacga
ataccagagtgcaaagcggtcgttctttcggccgatggtgtacaagcgacgcaacaagtt
atttcagagcatgaagagagggtgaaaaagctgttgagcagaccgtttaaaataccgatc
cctggatatcagctgtcggggcgtacgttaggaatacgtttgtctggtcctaggagagcc
ttacacgatcctgacgaggctaacgccctcgtagtttactcgcctcccgagatgtctgaa
catgaaaaattgaagctagatccatccaagctgctcgtacacgtagtggtagatcctttg
ttgtgcaatattttaaggcctcaccaaagagagggtgtaatgtttatgtacgaatgtgta
acgggaaaacgcatagagaatgcgtacggatgcatcatggcggatgaaatgggtctcgga
aagactctccagtgtataactttgctctggactctgttgaaacaaggcccggaggcgaaa
ccactgattgacaaagcaatcatcgttgctccgagttcgttagtgaaaaattggcaaaac
gaaattttcaagtggttgaacaacaaagttcagccgctggccatcgacggtggcaacaag
gcggacatagacaggaagctcaccggattcatgaagacctatggtcgcaggtgcgtgaat
cctgttttaataataagttacgaaacgtttcggttacacgcgcacgtacttcatcaagac
gacgtggggctcgtgttgtgcgacgagggacatcgtttgaagaattctgaaaatcaaacg
taccaggcgctcatcaacttaaaagccaagagaagagtattgctcagcgggacgcctata
cagaacgatctgttggaatatttctctctcgtacatttcgttaaccagggtttgttggga
accgcgcaggaatttcgaaaaaaatttgagataccaatcttacgcggtcaagacgcctcc
gctacggacgacgagcgaaaaatcgctcaagaacgtttgtcagaattggtgaccgtagtg
aacaagtgcctcatcagacgtaccagtgccttgctctcaaagtatctaccgttgaaacac
gaactagtcgtttgcataaaaatgaccaagttgcaaacggatctttataaaaatttcata
caaagcgatagcgttagaaagtcaatgttgtcagataattcggaaaatacaaagagagga
aagactctctccgcactgtcggcgattacgcttttgaaaaaattgtgtaaccaccccgac
ttggtgtacgacaaaataatggaaaaatccgaaggatttgagaaggctgccgagctcttg
ccaccaaattataacaccagagagattctaccagaactgtcgggcaaagtaatggtactg
gattgtcttctggcgtccatcaaaacgacgacgaccgacaagattgtgttggtgtctaat
tatacgcaaaccctggacctgttcgaaaagttgtgtcagaaacgttgctacaactacgtc
agactagacggcagtatgaccattaaaaagagatcgaaagtggtggacaaatttaacgat
ccgaccagcaacgatttcattttcatgctcagctctaaagccggcggctgcggattgaat
ctcatcggcgcgaatcgtctcgttatgttcgatcccgattggaaccccgcgaacgacgat
caggctatggccagagtgtggagagacggtcaaaagaagccgtgtttcgtatatcgtttc
ctttccactggtactatcgaggagaagattttccaacggcaggcgcataaaaaagcattg
agttcgacggtagtggatcaggaagaggacgttgctagacattttacgttgaacgatttg
cgagatttgtttaaattagaggagaacaccgtatcggatactcatgccaaattcaaatgt
agaaggtgcgtgaacggtggagaagtcaaaggaccgtccgagcaatcggactgcaattca
gatttgtcagattggagacacgctcataatccgcgaaatttgccggatataccgttgcga
cactgctggtccagtggaatttcattcgtgttccatcatcgttcgcacgagcaagtcaag
acggacaacaacagcagtcgaggggagagcagtgtcccgcagtttgatcgtacgggataa
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