Ceratina calcarata (carpenter bee): 108630772
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Entry
108630772 CDS
T06061
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108630772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108630772
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108630772
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
108630772
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
S1_RRP4
TUTase
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
108630772
NCBI-ProteinID:
XP_017889751
UniProt:
A0AAJ7JCY7
LinkDB
All DBs
Position
Unknown
AA seq
198 aa
AA seq
DB search
MEKHKDLIVCVPGQRLCISDKMNIAGSGTYEQQGYIYSKLAGVVKIVQEENTRTIEVHGI
TEQSIVPAPGDIVTAMVTIVNQRFCKCSIKCIGEIVLTRPYRGILRKEDVRAIDTDNTQM
YKCFRPGDIILARVMPMTEAHTYQLSTSENELGVVIAHSEEGVAMIPISWTQMQCPKTLR
KEFRKVAKVIPEQAITEQ
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacataaagatcttattgtgtgcgttccagggcaaaggttatgtatttccgac
aaaatgaatatagccggttcgggaacttacgagcaacagggatatatttattcgaaacta
gcaggtgtcgtgaaaatagtacaagaagagaatacacgtaccattgaggtccatggaata
acggaacaaagtatcgttcctgcacctggcgatatcgtaacggctatggttactatcgtt
aaccagagattttgtaaatgtagtataaaatgtataggcgagatcgtattgacgagacct
tacaggggaatcttaaggaaggaggatgtacgtgcgatagacactgacaatactcaaatg
tacaaatgcttcagaccgggagacatcatcctggccagagtcatgccgatgacagaggcg
catacttatcaattaagtacatcggaaaacgaattgggtgtggtaatagcgcacagcgaa
gaaggcgtggctatgatacccatcagttggacacaaatgcagtgtcccaagaccttgcgc
aaagaattccgaaaagtagcgaaagttataccagagcaggctatcacagaacaataa
DBGET
integrated database retrieval system