Ceratina calcarata (carpenter bee): 108630797
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Entry
108630797 CDS
T06061
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108630797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccal03041
]
108630797
Spliceosome [BR:
ccal03041
]
Common components
Common spliceosomal components
SR proteins
108630797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108630797
NCBI-ProteinID:
XP_017889791
UniProt:
A0AAJ7JD07
LinkDB
All DBs
Position
Unknown
AA seq
248 aa
AA seq
DB search
MSHGGRNECRIYVGNLPPDIRTKDIQDLFYKFGKVVFVDLKNRRGPPFAFVEFDDPRDAE
DAVYARDGYDYDGYRLRVEFPRGGGPSNNFRGGRGAGDSGRGGRGEMSNSRGRGPPARRS
QHRVLVTGLPPSGSWQDLKDHMREAGDVCFADVYKDGTGVVEFLRYEDMKYAVKKLDDSR
FRSHEGEVAYIRVKEDHNSGDRGRSEDREKGRSHSRSYSPRRRGSPTYSPLRRNYSRSRS
RSRSRSYD
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacggcggtagaaatgaatgtagaatttacgtgggcaatttgccgcccgatata
agaacgaaagacatccaagaccttttctacaagtttggtaaagttgttttcgttgattta
aaaaatcgcagaggaccaccgttcgctttcgtcgaattcgacgacccgagagatgctgag
gacgcagtatatgcaagggacggatatgattatgacggttatagactacgtgttgagttt
cctagaggtggtgggcctagcaataatttccgtggtggtcgtggtgcaggagatagtgga
agaggtggcagaggtgaaatgagtaattctagaggacgtggcccacctgctagaagatcc
cagcacagagttcttgtcactggcttacctccttctggaagttggcaagatctgaaagat
catatgcgcgaagctggtgatgtatgctttgctgatgtgtataaagatggtacaggagtt
gttgaattcctacgatacgaggatatgaagtatgccgtgaagaaattagatgattctcga
tttaggtcccatgagggtgaagtagcctatattcgggttaaagaagaccataacagtggt
gacaggggacgcagcgaagacagggagaagggccgaagtcattcacggagttatagtcca
cgacgtcgtggatcgcccacctattcaccattacgacgtaattactcgcgatcaagatct
cgttccagatctcgttcatacgactag
DBGET
integrated database retrieval system
