Ceratina calcarata (carpenter bee): 108630965
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Entry
108630965 CDS
T06061
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108630965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108630965
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108630965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
108630965
NCBI-ProteinID:
XP_017890063
UniProt:
A0AAJ7JCH3
LinkDB
All DBs
Position
Unknown
AA seq
220 aa
AA seq
DB search
MSDEAAKNEFILRPMSCELNQLSMPDGSAMLMHGDTAVVAGIYGPIEAKPQKMIYDKASV
EVSYSPIKGPAKVDDRLTEMYIKETCEAAIIVTFHPATAICVNIQEEEDSGGILACTINA
ACLALINAGIPMKFTIAAVSCMIEEDTGDIVLDPDSIKLQNARAEFTFAFDSMKKDVVCC
HTAGCFTETEFLEAMDKCKQASQYVFDFYRNLVKKYANVI
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgaggcagctaagaacgaatttatcttgaggccgatgagctgcgaattgaat
caactgtccatgccagatggatcggcaatgttgatgcacggtgacaccgcagtggtcgct
gggatttatgggcccatagaagcaaagccacagaaaatgatttacgacaaagcctcggtg
gaagtttcatacagcccaatcaaaggcccagctaaggtggatgacagactgacagagatg
tacataaaggagacctgtgaagctgcaataatcgtcaccttccatccggcaacggccata
tgcgttaacatacaggaagaagaagattccggtggcatattggcttgtacgattaatgca
gcttgcctggccctcatcaacgctggcatcccaatgaaatttaccattgcagccgtcagc
tgcatgatagaagaagacaccggcgacatcgtgttggatccagatagtattaaattacag
aacgccagggcggagttcaccttcgcgttcgacagtatgaagaaagatgtcgtatgttgt
cacaccgccggctgtttcaccgaaacggagttcttggaggcaatggacaaatgcaagcaa
gctagtcaatacgtcttcgatttttatagaaaccttgtaaaaaagtacgcgaacgtcatt
taa
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