Ceratina calcarata (carpenter bee): 108630971
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Entry
108630971 CDS
T06061
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccal04131
]
108630971
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccal04812
]
108630971
Enzymes [BR:
ccal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
108630971
Membrane trafficking [BR:
ccal04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108630971
Cytoskeleton proteins [BR:
ccal04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
108630971
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
MIT
RuvB_N
AAA_22
AAA_5
AAA_16
TIP49
NPHP3_N
Mg_chelatase
AAA_14
IstB_IS21
RNA_helicase
nSTAND_NTPase5
nSTAND3
DUF815
Motif
Other DBs
NCBI-GeneID:
108630971
NCBI-ProteinID:
XP_017890068
UniProt:
A0AAJ7JD67
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MSYSDGGRPIRKYGTKSPKKLCVTKNENSDKTITTINCSNHHHNHYHHSHRFLDAPQPSV
HKRNLYIVSYPLIVLFNVLRTLLYQLYVVFKYLYTSTSQLIQRRQAYKQTCQLEVVVGQK
SGDSLTNNNLTATGQTENDGMSQVPRRSIGPGPGDPLLAKQKHHHRRAFEFISKALKIDE
DNEGQKEMAIELYKKGIGELEKGIAIECNGGRGEVWEHAQRLHDKMRTNLAMAKDRLDFL
VSVCELKKLDISDEYRTSGSKMDNEHPGKNLRARRNMHTLQTTRSPLNTNHNTKNTNSTQ
TVNVGQNTCTQIPKLRPRSPKNYSAHSEASGRKLSVPGKRMGTAISKSQTLPRSMGRSTS
VQPCHRVTPIKPSSTPPSVKRQLSVPGNGSPIRRPGTPTASNSNRGTPTRKAPILKGIDP
KLAQVILDEILEGGTAVHWEDIAGQDTAKQALQEMVILPSLRPELFTGLRTPARGLLLFG
PPGNGKTLLARAVATQCNATFFSISAASLTSKYVGEGEKLVRALFGIARELQPSVIFIDE
VDSLLSERRDNEHEASRRLKTEFLVEFDGLPCNPEERVLVMAATNRPQELDEAALRRFTK
RVYVTLPDLRTRITLLKRLLAKHNDPLTTIELNEMAVLTEGYSGSDLTGLAKDAALGPIR
ELNLDQVKELDLNSVRNITMQDFRDSLKRIRRSVSPASLAAYEKWSFEYGDVSL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagcgatggcgggcgtccaatacgaaagtacggcaccaagtcgccgaaaaag
ctttgcgtgacgaagaatgagaatagcgataaaacgataaccaccatcaactgcagtaat
catcatcacaatcattaccatcatagccaccgctttctcgacgcccctcagccgtcggta
cacaaacgtaatctctatattgtttcataccctttgatagtgcttttcaatgttctgaga
acgcttctctatcagttgtacgtggtgtttaagtatttgtacacatccacgtctcagctg
atccagcggagacaagcttacaagcagacctgccagctggaggtcgtagttggccagaag
tcgggcgacagtttgacgaataacaatttaactgcgaccgggcagacagagaacgacggg
atgtcgcaagtacctagaagatccatcggccctggcccaggagatcctttacttgctaaa
cagaagcatcatcatcgtagagcgttcgaattcatcagtaaggcactgaagattgacgag
gacaatgaaggtcagaaggaaatggcaattgaactttacaagaagggaatcggcgagttg
gaaaaagggatcgccatcgaatgcaacggtggccgtggggaagtatgggaacatgcacaa
agacttcacgataaaatgcgcacgaatttggctatggcaaaggacaggctcgacttcctt
gtgagtgtgtgtgagctgaaaaaactggatatctccgatgaatatcgtacatctggaagt
aaaatggacaacgaacatccgggcaagaatctgagggcccgacgtaacatgcacacgtta
caaacgactcggtctcctttgaatacaaatcacaacactaaaaacacaaacagtacacaa
acagtgaacgtagggcagaatacatgcacccaaattcccaagttaaggccacgctctcca
aaaaattattctgcccattccgaagcatcggggagaaaattatccgttcctggaaaacga
atgggtacagcgatcagcaagagtcaaacgttaccgcgtagcatgggtcgttcgacgtcg
gttcaaccttgccaccgagtcacccccataaaaccatcgtccacaccaccgtcggtgaag
agacaattgtccgtacctggaaatggttcgcctatcagaagaccaggaacccctaccgcg
tcgaacagtaacagaggaacgccaacgcggaaagcaccgatcctaaagggtatagatccg
aagctcgcgcaagttatcttggacgaaattttagaaggaggaacagccgtgcactgggag
gatatcgctgggcaagacaccgcgaaacaggcactgcaggaaatggtcattttgccatcg
ttaagaccagaattgttcactggcttaaggacgcctgcgagagggttactactgttcggt
ccgccggggaacgggaagacattactcgctcgcgccgtggctactcagtgcaatgccacg
ttcttctcgatatccgctgctagtctcacgtcgaagtacgtgggggaaggagagaaactg
gtacgagctcttttcggcatagcgcgggaactacagccgtctgtgatctttatcgacgaa
gtagattcactgttgagcgaacgtagagataacgaacacgaagcctcgaggcgattgaaa
acagaattcttggtcgaattcgatggtttgccgtgcaatccagaggagagggtgctagtc
atggctgctactaacaggcctcaagaattggacgaagccgctttgaggagattcacgaaa
cgagtatacgttacgttgccagatttgcgaacaaggatcacgttactcaaacggcttcta
gctaaacacaatgacccgttgacaacgatcgaactgaacgaaatggcagttctgaccgag
ggatattcgggaagcgatttgacgggtctagcgaaagacgcggctctcggtcctatcaga
gaactgaatctagatcaagtgaaggaactggatcttaattctgtgcgcaacataacgatg
caagactttcgtgattcgcttaaaagaatacgcagatcggtatcgcccgcgagtctagcc
gcttacgagaagtggagcttcgaatacggcgacgtaagtctatga
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