Ceratina calcarata (carpenter bee): 108631012
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Entry
108631012 CDS
T06061
Name
(RefSeq) splicing factor, arginine/serine-rich 15 isoform X1
KO
K13191
RNA-binding protein 16
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccal03021
]
108631012
03041 Spliceosome [BR:
ccal03041
]
108631012
Transcription machinery [BR:
ccal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108631012
Spliceosome [BR:
ccal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108631012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108631012
NCBI-ProteinID:
XP_017890159
UniProt:
A0AAJ7JCF6
LinkDB
All DBs
Position
Unknown
AA seq
1647 aa
AA seq
DB search
MEAVKAFNAELSALYDVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGVEKDVFAPRFAKNMQTTFLNLLKCPQEDKSKVIRVLNLWQKN
AVFPSEVIQPLFDLADPNHPIHKEQATVNTNGTLLVSATNNTASAAANTAVKTPPLTGKN
AVKDQKLFSSAKPIDPAWLAQTKMETANIVNANKLLGQSNSSQMDASFLDQLQHLQQLLL
KKQESTNEQKSCVKFDKKLLDFDYGEEEDDDVVVASSPAVTGTSGIGQHNAASSAGNSLE
SLGLLLTNPEVLRQLQTLQQTMQGSSSQHETEEKMRKLQQMKQQEEEFDKHLAQTVPNLP
FASECELKPSDILKPNQQTAYATSVGSGGVMQDMSQPPPGYPPALPYVSQPLSNLRQINQ
QQQQQQQQVHQNQKSPPLHDERQDAQDYSGNGARRDSSSVEIVNCENTRSQSRSPDRYGR
HHSRSRSPRHRDRDRDRERDRDRDRDKRSRSRSRSRRRRSRSRDTRGRDRKRDDSREKMT
EEEREKERERRKRGLPPIVRDKLSVCSTTLWVGHLSKLVHQEELSDTFGEFGDIVSIDLI
SPRGCAFICMNRRQDAYRALTKLKNHKMQGKAITLAWAPGRGVKGKEWKDYWEVELGVSY
IPWNKLINVTDQDLELLEEGGMIDEDTLPPNLKGKLKHSGTNADMLQQQLQLQQQALAAA
AAAAAAAAAGIPSLADGIVNVMQSSTSSQQQQQQSQQQQQQQQQSQQQGQQQQQVIDTSQ
PPPIRPPTSAALLPPPNAQLQMMPSAFTMPGVPRMIGPMGLPMAHSLMPNVPIGVPPPNM
QSLLGPPGMMQTMLTPSVNSPFGAGVGVGLLTQIPLPAPAAPSDKPNSTGMPHNVPPIGV
PPPTTETGMPNLPMLRQPYGVGPSAPLQMQLPHQQHSAADDMDVEMEDAMPQSSNGAKNK
NNLTDHQAISQQQNEERTDSDQQEQHRDYKERDSRDHRGDNRERRDRETHLQQQQQQQQH
RDREAVGNDSKMDRGRDRGRGRDRGRDRRRDLRDRDRDDRGRERENRENREGNPQTQNSI
QESEATTPKKDCKPSLADRLRQLADGTLPLEDRVDRIIATRNRQERDRPDRTFPQEDGRA
TRAEPLSSLIDLPKFGLPQERGGGGGGGGDFSARPPDFRNQQDPRDFQQQQQQQQQQQQQ
QQRDGRQTFGRGHRGSQIHEEFMDAPRLQGGMYQDDLFDSRIHSGQQRVVEDFGRLGPLR
EQREEFDRSEGRGRRQLVDDRDRFDYEIRGRDGFDPRVVVQDGFDPRGHLDRSDFEPRRR
EFFGIDPIFGIPPPIMGPRGPRPGHPDGFGSRPTPLGARGPGPLMFHPRGLGPRPLRPGM
RPFGPRGGGGGGGGGPPFDPRDPADAFFRPPFDDIRPHARAPFGPMGPPPPPSIIPPESA
VPWRNQELPPGSWSSDSAENHPQRDKKGGGGGGGGGGVVVGGGGVVVVVGGSNKHPNNNQ
QQNMDRENRNRGRKSRWANVSPSGEESIGGDESREQEPCLSVNVEENKEAVMEAAVAAAA
AAAAAEEEEGEEEEEGCMDVMVRPKEEEVKDAIETKEMIRDERQEEEQEEEEELVVVVGK
TETKQDEGIEMKKEEEEEGEEDRSRDS
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggttaaggcgtttaatgcggagctttcagctctgtacgatgtcaagccgccc
atttccaaagcgaaaatgaattctctaaccagaggtgcaatcaaggccatcaaattctat
aagcatgtcgtgcaaagcgttgaaaagttcattcagaaatgtaaaccagagtacaaagtg
cctggattgtacgttatagactcgatcgtgcgccagtccagacatcagtttggcgtagag
aaagatgtctttgctccgcgctttgccaagaacatgcaaaccactttcttgaacctttta
aaatgtccgcaagaagataagagcaaagtaataagagttttaaacctgtggcaaaaaaat
gcagtctttccctcggaggttatacaacctttgttcgatcttgccgatccaaatcatccg
atacacaaggaacaagccacggtcaataccaatggtacacttttggtttctgcaacgaat
aatacggcgtcggcagcggccaatacggctgtaaaaactcccccattgaccggaaagaat
gcagtgaaagatcaaaaattgttttcttccgcaaagccgatcgaccctgcttggctcgca
cagacgaaaatggagacggcaaacatagtgaatgctaataaactcttagggcaatcgaat
tcgagccagatggatgcctctttcctcgatcagttacaacacttacaacagttattgtta
aagaaacaagagtctacgaatgaacagaagagttgtgtaaagtttgataagaagctgtta
gatttcgattacggcgaagaagaggatgacgatgttgtcgtcgccagttcaccagcagtg
accggaacgtccgggatcggccaacataacgcagctagttccgcgggaaacagtttggag
agccttggacttttattaacaaacccagaggtattgaggcagcttcaaacgttgcaacaa
acgatgcaaggaagttcgtcgcaacacgaaacagaagaaaagatgcgtaaacttcaacaa
atgaaacaacaggaagaagaattcgataagcacctagctcaaactgttcctaatctaccg
tttgcatctgaatgcgaattgaagccttcggacattttaaaaccgaatcagcaaaccgca
tacgcgacaagtgtcggtagtggcggagttatgcaagacatgagtcagccgcctcctggg
tatccaccggctctaccgtacgtctctcaacctttatcgaacttgagacagatcaatcag
cagcaacagcagcagcaacaacaggtgcatcaaaatcagaagagtccgccgctccacgac
gaacgccaagacgcgcaagattattccgggaatggtgcgagacgagatagcagcagcgta
gaaattgtaaattgtgaaaacacaaggtcgcagagtagatcgcccgaccgatacggtaga
catcacagtcggtctagatcgccgcgacacagggacagggacagagacagggagagggat
cgagatcgggacagggacaagcgttctcgatcgagaagcagatccaggagaagaaggtct
cgctcgagggacacgaggggtcgtgatagaaaacgcgacgacagtcgagagaaaatgact
gaggaagagcgagaaaaagaaagggaaagacgtaaacgaggactaccaccgatcgtcagg
gacaaattgagcgtttgcagtactactctttgggtaggacatctatcgaaattagtacat
caagaagaattgtcggacacttttggagaatttggtgacattgtcagtatagatttaatt
tcacctaggggctgcgcctttatatgcatgaacagacggcaagacgcgtacagagctctc
actaagctgaagaatcataaaatgcaaggaaaagctatcacgttagcttgggcaccagga
agaggagtaaaagggaaagaatggaaagattattgggaagtcgaattgggtgttagttat
attccatggaataaattaattaacgttaccgatcaagacttggaattattggaggaaggg
ggcatgatcgacgaggacactttgccaccgaacttgaaaggtaaattaaagcattccgga
acgaacgcagacatgcttcagcaacagttgcagttacaacagcaagccttagccgcggcg
gctgctgctgctgctgctgctgctgctggtattcccagcttggcggatggtatagtgaac
gtgatgcaatcgtcgaccagcagtcagcagcagcagcaacagtctcaacaacagcagcag
cagcagcagcagtctcagcaacaaggccaacaacaacaacaagtaatcgatacgagtcaa
ccaccaccaatcagacctcccacgtcagctgccctcttaccaccaccaaatgcacagtta
cagatgatgccgtctgccttcacgatgccaggagtgcctcgtatgatcggaccaatggga
ctgccgatggcgcacagtttgatgccgaacgtcccgataggcgtaccacctcccaatatg
caaagcttgttaggaccaccgggaatgatgcaaacgatgctaacgccttcggtgaattct
ccgtttggcgcgggtgtcggcgttggtttgttaacacagattcctctgccagctcccgct
gcaccttccgataaacccaattctaccggtatgccacacaacgtaccgccgataggcgtt
ccaccgccaacgacggaaacgggaatgccgaatttgccaatgttacgtcaaccgtatggc
gtgggaccttcagcgcctcttcaaatgcaactacctcaccagcaacattctgccgccgac
gatatggacgtggaaatggaggacgcgatgccgcaaagttcgaacggagctaagaataaa
aataatttgaccgaccaccaagcgatttctcaacaacaaaacgaagagcgaacggactcc
gatcagcaggagcagcatcgggattacaaggaaagagacagcagagatcatcgtggtgat
aacagagaaagaagagacagagagacacatttacagcagcagcagcagcagcagcagcac
agagacagggaagcggtgggtaacgattcgaaaatggatcgtggacgggacagaggtaga
ggcagggatcgcggacgcgatcgtagaagggatctcagagacagggatagggacgatagg
ggaagggaacgggagaacagagagaatcgagaaggaaatccacaaactcaaaactcaatt
caggaaagtgaagcgacaaccccaaaaaaggattgtaaaccgagtctagctgatcgccta
cgtcaattggccgacggcacactgcctctcgaagatcgcgtcgatagaataatcgccact
cgtaatcggcaggaacgcgacagacccgacagaactttcccgcaagaagatggccgagcg
actcgagcggaacctctttcttctttgatagatctaccgaagttcggcttgcctcaggag
agaggcggcggtggcggcggcggcggcgacttttctgctcggcctccagatttccgtaat
caacaagatccaagagatttccagcagcagcagcaacagcaacagcagcagcaacagcag
cagcagagagatggcagacagactttcggaagaggtcatagaggatcgcaaatacacgaa
gaatttatggatgctccgagattgcaaggagggatgtatcaagatgacttattcgacagc
aggatacatagcggacagcaaagagtagtggaagatttcggtaggctcgggccgctcaga
gaacaaagggaggaattcgatagatccgaagggcgagggagaaggcagctcgtcgacgat
cgggaccgtttcgattacgagattaggggacgggatggtttcgatccacgagtagtggtt
caagacggtttcgatcctaggggacatctcgaccgaagcgacttcgagcctaggagacgc
gaattctttgggatcgatcccatttttgggataccgccgccgataatgggacccagggga
cccagacctggacatcccgacggatttggatcgcgaccaacgcccttaggagctcgtgga
ccgggtccgttaatgttccatcctcgaggtttgggacctcgtcctcttcgtcccggaatg
aggcctttcggtcctcgcggcggcggcggcggcggtggcggcggtccacctttcgatcct
cgagacccggcggacgcctttttcagacctcccttcgacgatattcgccctcacgcgaga
gcacctttcggacctatgggcccaccaccgccgccatccattattcctcccgagtctgcc
gtaccctggagaaatcaagaacttccgcctggttcgtggtcttcggattctgcggagaat
catccgcaaagagataagaaaggtggcggcggcggcggcggcggcggtggtgttgttgtt
ggtggtggtggtgttgttgttgttgttggtggttcaaacaagcatccgaataacaaccag
cagcagaatatggatagagagaatcgaaacaggggacgaaaatctagatgggccaacgtg
agcccatccggggaagaatcgatcgggggggatgaatctagagaacaagaaccatgtttg
agtgtgaacgtcgaggagaacaaggaagctgtaatggaagcagcagtagcagcagcagca
gcagcagcagccgcagaagaagaagaaggagaagaggaagaagaaggatgcatggacgtg
atggtgagaccgaaggaagaggaagtgaaagatgcgatcgaaacgaaggaaatgattcgt
gacgaacgacaggaggaggagcaggaggaggaggaggaattggtggtggtggtgggaaag
acggagacgaaacaagacgaaggcatcgaaatgaagaaggaggaagaggaggagggagaa
gaggatcgcagcagggattcttag
DBGET
integrated database retrieval system
