Ceratina calcarata (carpenter bee): 108631318 Help Entry 108631318         CDS       T06061                                  Name (RefSeq) exosome component 10   KO K12591   exosome complex exonuclease RRP6 [EC:3.1.13.-] Organism ccal  Ceratina calcarata (carpenter bee) Pathway ccal03018   RNA degradation Brite KEGG Orthology (KO) [BR:ccal00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     108631318  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccal03019]     108631318 Messenger RNA biogenesis [BR:ccal03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Exosome cofactors      108631318 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Lipase DNA_pol_A_exo1 HRDC PMC2NT Abhydrolase_1 Abhydrolase_6 LIDHydrolase Lipase_3 Motif Other DBs NCBI-GeneID:  108631318 NCBI-ProteinID:  XP_017890648 UniProt:  A0AAJ7JE08 LinkDB All DBs Position Unknown AA seq 1300 aa AA seqDB search MENEDWSGDCQTTENEAQVSDPPEINQVIPGYTNFKDYIQEAYDAIKFGIKAANNLPTGS NFKYYACFPSFLKAKNSNTDLLLNAMQDILGKISVKGSVVNRDIEEKFELLIEANDILQD RANALMDEECGITKKSEVELVVTHAKTQQMNGSWNSKLVSSTSQKTSQDESSICLLAGKN VHRPQLSFKDKIDNSLKPWCPRIKDKPNSRRPLAIYLEEGENGEVFCHPYEHELEMFVIP NDQLEKTKPLMYKPLKDTKLIMIKDPPDIKLLLDDLKEYKEIAVDLEHHSYRSFQGITCL MQISTRDTDYVIDTLSLRSELHELNEIFTKPTILKVLHGADLDIQWLQRDLSLYIVNMFD THQAAKQLNLPYLSLAYLLKTYCNVDPNKHFQMADWRIRPLPEQLLKYAREDTHYLLYIK DILTNALIDAANGQSNILKAVYDRSTDICKKTYVKPVWTEESFMNMYKKSNRIFNNKQLY ALRELHKWRDQTAREEDDSIGYVLPNHMLLNIADTLPREMQGILACCDSIPPLVRQNLLK LHKIILKAREQPLIKTGLEELKQRLTQRNVQTASSKTWTSHDIPSGMEARADLPCLLDNG NKPDSPISLTATEHTVTVFDDSSTSENEDEDRKSTGKKKFVFVSPFERYKRVIPMVAEEE SRERERQKQEEERANKLTETESQGEDRELKEKDTELEESKNRVHEHFKKVAKRKLFQTPL SQMEGRKKKRDSNINKQETERYPEQKPLSSIPSLKDVYNESTLRVAGYLTRLDDVADLRS QEGREMSDMRASNDETINPMRSRGKGEKKRVMKQLKQKGMMPSDKFNYNTIDFSSFQGGS KNSINQTNFDQTVKKKKEKSRRRKNRVRLDTKISRKMQLSVIVFVELSLLFVAHSHIVSE EDRNVDKNSSSYISHLTDFIFDLSSDSEVDGKSHQVDCLGLGKTVASALEWFFMSNPNGT NALEMQFLLSSRKQPQRVKVIIGKQFGLEWTDFQIERKTIIIVHGFLSHGQEPWISNLEK AFLRWGDVNVVVVDWSAGGNTWNYYKAAVNTKVVGYQISRFLEHIENATYAGNNSDKIVW GSIYLVGHSLGAHICGFTAKELKKRHSPWKVERITGLDPAQPCFKNADPAVKLAKSDAPF VDVIHTNGKLLHEIGLGLPGPIGHVDFYPNGGKSQPACIKSNSSYFSYLPVPIQVIDKSI CSHGLSHHYLIESLVTDVKHNCTFWAHHWDLSYRNLFRAARGTCNRSICSEMGINAINYL QRGTFFVITADSAPFCVNNTRMLDEIIIHLEKEFGDHVDD NT seq 3903 nt NT seq  +upstreamnt  +downstreamnt atggaaaatgaagattggagtggcgattgccaaacgacggaaaatgaagcgcaagtcagt gacccaccagaaattaaccaagttatccccggatacacgaattttaaagattacattcag gaagcttacgatgcgattaaatttggaatcaaggctgctaataatttacctactggatcg aacttcaaatattatgcgtgtttccccagttttctcaaagccaaaaattcaaacacagat ttactattgaatgctatgcaagatatattaggcaaaatcagtgtcaagggcagtgttgta aatcgtgacatcgaagaaaagtttgaactcctaatagaagcgaatgatattcttcaagat cgagctaatgctttaatggatgaagaatgtggcataactaaaaaatctgaagtggaattg gtagtcactcatgcgaagacgcagcagatgaatggtagctggaacagtaaattggtatca tcaacaagtcagaaaacttctcaggatgaatcttctatatgcttgttagctggaaaaaat gttcacagaccacaattatcgtttaaagataaaatcgacaatagtctgaaaccctggtgt cccagaatcaaggataaacctaattctcggagaccattggcgatttatttagaagagggt gaaaatggcgaggtgttttgtcacccttacgaacatgaactggaaatgttcgtaattcct aacgatcaattggaaaagactaaacctttgatgtataaacctttaaaggatactaaattg ataatgatcaaagatccacccgatatcaagttattgttagatgatttaaaagagtacaaa gaaatagctgtggatctggagcatcattcttaccgaagtttccaaggaataacttgtctg atgcaaatctcgacgcgagatactgattatgtgatagatactctgtcattgcgttctgaa ttacacgagttgaacgaaatttttaccaaacccacgatactgaaagtgcttcatggagca gatttagacattcaatggcttcagcgagatctatctctgtacatcgtcaacatgtttgat actcatcaagcggcgaaacagttgaacctaccgtatttaagtctagcgtatttgcttaaa acctactgcaacgtggatcctaataaacattttcaaatggccgattggcgtatacgacca ttaccagaacaactcttgaaatacgccagggaggacacgcattatttactgtacataaaa gacattctaacgaatgctctgattgatgcagctaatggccagtcgaatattttgaaagcg gtttacgataggagtacagatatttgcaagaagacttacgtgaaaccagtatggacagag gaaagcttcatgaacatgtacaaaaagagtaacaggatattcaacaacaagcaactgtat gctttgagggagttgcacaagtggcgggatcaaactgcgagagaagaagacgatagcatc ggttacgttctaccgaatcacatgcttttaaatatagcagacacattgccgcgcgagatg caaggaattctggcatgctgcgactcgattcctcctttagtcagacagaatctattgaaa ctgcacaaaataatattgaaggctagggaacagccgctcattaaaacagggctggaggag ctcaagcagagactgactcagagaaacgtgcagacagcaagctcaaagacgtggacgtca cacgatattccaagcggtatggaagcgagagccgatttaccctgtctgttagacaacgga aacaagcctgactcaccgatttctttgactgcgactgagcatactgtcactgtattcgat gactcgtctacatccgagaacgaggatgaggaccggaaaagtacgggaaagaaaaagttc gttttcgtaagtccgttcgaacgatataagcgagtgataccaatggtagcggaagaagaa tcgcgagaaagggagagacaaaaacaagaagaggaacgcgcgaataaactgacagagacc gaaagtcaaggagaagatagagaattaaaagaaaaagatacagaactagaagagagcaaa aatcgtgttcacgaacattttaagaaagtcgctaagaggaaactatttcagacgccgctg agtcaaatggaaggtcgtaaaaagaaacgtgattcaaatattaataaacaggaaacggaa cggtatcctgaacagaaaccgttaagttcgatcccgtcgctgaaggatgtgtataatgaa agcacgttgagagttgcagggtatttaacaagactagacgacgtagcagacctacgttcg caagaaggtagagaaatgagcgacatgcgagcttcaaacgacgaaacgatcaatcccatg cgttcaagaggaaaaggagaaaagaagcgtgtaatgaaacagttgaaacagaagggaatg atgccatcggataagtttaattacaacactatagattttagttcgttccaaggaggtagc aaaaacagtatcaaccaaacgaactttgaccagacagtgaagaagaagaaagaaaaatcg cggaggaggaagaatcgagtacggttggatacaaaaatatccaggaaaatgcaactgtct gtaatagtattcgttgaattgtctttactttttgtcgcgcatagtcatatcgtttcggaa gaagatagaaacgttgacaaaaattcgagtagttacattagccatttgacagactttatt ttcgacctctcttctgattctgaagtagatggcaagtcgcatcaagtagactgtctcggc ttaggcaagacggtagcctcagctttggaatggtttttcatgagcaatccgaatggtaca aacgctttagagatgcaatttttgctctcatcgagaaagcagcctcaacgcgttaaggta ataatcggcaaacagttcggtttggaatggacggattttcaaatcgaacgaaaaacaatc ataatagttcacggtttcttatcccacggtcaagaaccatggatcagcaacttggaaaaa gctttccttcgatggggagacgtcaatgtagtagttgtagactggagtgctggcggtaat acttggaattattacaaagctgctgttaacacaaaagtagtgggctatcaaatatcaagg tttctagaacatatagaaaatgccacatatgctgggaacaattccgataagatcgtttgg ggctcaatatatttggtgggtcacagtctcggtgcacatatctgtggtttcactgcaaaa gaattgaaaaaaagacacagtccatggaaagtagagagaataacaggattagatcctgcg caaccttgcttcaaaaacgcagaccctgccgtgaagctcgccaaatccgatgcacccttc gtggatgtgattcacactaatgggaaattgctacacgagatcggattaggtttaccaggc ccaataggccacgtcgatttctatccgaacggtggcaaatcccaacccgcctgcataaaa agcaactcttcctacttcagttatttaccggttcccattcaagtgatcgacaagtccata tgcagtcatggtctttcgcaccattacttaatcgagtccctggtaactgacgttaagcac aattgcacattttgggcgcatcactgggacctatcgtatcgaaacttgttccgcgcggcc aggggaacttgtaacagaagtatctgttcggaaatgggaataaacgctataaattatctt caacgaggaacgttcttcgtcattactgccgacagcgcgccattttgtgttaataacact cgcatgctggatgaaataatcattcatttggagaaggagttcggtgaccatgttgatgat taa

DBGET integrated database retrieval system