Ceratina calcarata (carpenter bee): 108631417
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Entry
108631417 CDS
T06061
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
KO
K11088
small nuclear ribonucleoprotein D3
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108631417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108631417
03041 Spliceosome [BR:
ccal03041
]
108631417
03032 DNA replication proteins [BR:
ccal03032
]
108631417
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
108631417
Spliceosome [BR:
ccal03041
]
Complex A
U1 snRNP components
Sm proteins
108631417
U2 snRNP components
108631417
Complex B
U1 snRNP components
108631417
U4/U6.U5 tri-snRNP components
108631417
Complex C
U2 snRNP components
108631417
DNA replication proteins [BR:
ccal03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
108631417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Tail_tube
Motif
Other DBs
NCBI-GeneID:
108631417
NCBI-ProteinID:
XP_017890816
UniProt:
A0AAJ7NE65
LinkDB
All DBs
Position
Unknown
AA seq
142 aa
AA seq
DB search
MSIGVPIKVLHEAEGHTITCETNTGELYRGKLVEAEDNMNCQMEKITVTYRDGREAQLEN
VYIRGSKIRFLILPDMLKNAPMFKRPGGKGSGTAGRGKSAILRAQARGRGRGQNQRGRGT
GSAPWLNQQNQPGGSQAGKGRG
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataggagtaccgatcaaagtgctccacgaagcggagggccataccataacctgc
gagacaaacacgggcgagttgtatcgcgggaaattagtggaggccgaggacaacatgaac
tgtcaaatggagaagatcacggtgacctacagggacggtagggaggctcagttagagaac
gtttatatcaggggctcgaaaatcaggtttctcattttaccggacatgttgaagaacgcg
ccgatgtttaagagacctggtggcaagggctcaggcaccgctggccgagggaagtccgct
atcctccgcgcccaagcgcgcgggaggggcagaggtcagaaccagagaggtagaggtacg
gggtcggcgccgtggctaaatcaacagaaccaacctggaggatctcaagcaggaaaagga
cgaggataa
DBGET
integrated database retrieval system
