Ceratina calcarata (carpenter bee): 108632116
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Entry
108632116 CDS
T06061
Name
(RefSeq) dynein regulatory complex subunit 6-like isoform X1
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccal04121
]
108632116
Ubiquitin system [BR:
ccal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108632116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_4
LRR_6
LRR_At5g56370
LRR_RPS2
LRR_Zer-1
LRR_14
F-box
F-box-like
LRR_EndoS
LRR_At1g61320_AtMIF1
LRR_8
F-box_5
Motif
Other DBs
NCBI-GeneID:
108632116
NCBI-ProteinID:
XP_017891936
UniProt:
A0AAJ7NF12
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MSDYKSRNFLTETDNLQLPIDVIIHIMSYLSTSDRISAGLVNQTWHEASLARKFLDQEEL
VLGRPRADNLNEVFEVLQRSTRPFYHFVFREVELKRNMPIWDHYGPQMKSLVLYRCDLSE
KTLVEILKYLKSLRTLRINSCRECLMSGRLLEDKNDIKELAQTFKNVRELSLAHNRFLSD
ALFNRLVAICPNLESFSLMGCQISFHCGLYKKFYPENIALCDASKSILTFANTLQYLKQQ
ASKLKHLNFGYTLIDGTALATLSALPDLRLESLILQACYQLTIEGIRGLTQYQSYLKVLD
LSFCVRITDVSLLHICKNLTKLETLKIKRCRSVTDNGVKYIQLLKNLKELDISEDEQLTA
DCITRGICSSCKVDMKQHIDSENVNHDSLDINWSAEDRIRKENMRILSVNALHLHEESVE
SISKSFPNLRRLELSNCFNGVTDKTIQMIFKELVHLQTLKISQCDEVSDAGLTGMGAGNH
EYVQKIRVVHKPEFTESRLRISLRSKAEEEIVRDADRKREIMRLCENVSKPLNTFSGFSL
IRLKGLQELDLSGCNRITDVSLKHAFAFPELRILNLSQCQQITHIGLDYLSKNNPAIEYL
DLNRCYNISDVGISYLAQRLHRLKQLLIQGCLQLTDHTLDSIKLYCKSLQYLDTRFCRGM
TAAGIESLTNLYVDWHKQTEDIVSPGSAPPLPPLPSLP
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactacaaaagtaggaatttcctgacagaaacggataatttacaattgcctata
gatgttatcatacatataatgtcgtatttatccacgtctgataggatatcagcaggacta
gtgaatcagacatggcacgaagcttctcttgccagaaagtttctggatcaagaagaattg
gtccttggcaggcctcgtgcagacaatctgaacgaagtgttcgaagttctacagcgttct
acaagaccgttttaccactttgtgtttagagaagtagaattgaagagaaatatgccgatc
tgggatcactacggtcctcaaatgaaaagtctagtattatatcgctgcgacctgagtgag
aagacgcttgtagaaatcttgaaatacttaaaatccttgagaacattgcgcattaattcg
tgcagagaatgtctgatgtctggcaggcttttggaagataagaatgacataaaggagctg
gcacagacgttcaaaaacgttcgagaactgagtctcgcgcataatcggtttttaagcgac
gctcttttcaataggctagttgccatttgcccgaatttggagtcgttcagtctaatgggc
tgtcagatatcgtttcattgcgggttgtataaaaaattttatccagagaacattgcgtta
tgcgatgcctcgaaatcgattctcactttcgccaatacgcttcaatacttaaagcaacaa
gcgtcaaagctgaaacatttgaatttcggttacactttgatcgatggcaccgctttagcc
accttatcggctttgccggatttgagactcgaatctctgatactgcaagcatgttatcag
ttaacgatcgaaggcatcagaggattgacacagtatcaaagctatctgaaagttctcgat
cttagcttttgcgttcgtatcacagacgtgagtttgctgcacatttgtaagaatctaacg
aagctagaaacgctcaagataaagagatgccgctcggtaaccgacaacggtgtaaagtat
attcagttgttaaagaatttgaaagaacttgacatctccgaagacgaacagctcaccgcg
gattgtatcactcgaggcatctgctcaagctgcaaagtggacatgaagcagcacatcgat
tcggagaacgtaaatcacgattctcttgacattaattggagcgcagaggatagaataaga
aaagagaacatgaggattttgtcagtgaacgcgctgcatcttcacgaagagtcggtcgaa
tcgatatcgaagtctttccctaacttaaggcgtctcgaacttagtaactgttttaacggg
gtcactgataaaacgatacagatgatattcaaggagcttgtacatttgcaaacattaaaa
ataagccaatgcgacgaggtcagtgacgctggcttaacgggtatgggtgctggtaaccat
gagtatgtccaaaaaatacgagttgtacataaaccagaatttacagagtccagattaaga
atcagtttacggtcgaaggccgaggaagagatcgtgcgcgacgccgacagaaaacgggag
atcatgcggctctgcgagaacgtgtccaagcctttgaacacgttctccgggttctcgttg
atcaggctcaagggccttcaagagctcgatctctccgggtgcaatcgaataaccgacgtc
agtttgaaacacgcattcgcatttccggaattgagaatattgaatttgagccagtgtcaa
cagatcacgcatatcggattagactatttatctaaaaataatccggcaatagagtacttg
gatttgaatcgctgttacaatatatcggacgttggaatatcgtacctcgcgcaaagattg
cacaggttgaaacaattgctgatacagggatgtttgcaacttacggaccacacgctcgac
tctataaaattatattgcaaaagcctacagtacctggacacgcgtttctgccgtgggatg
acagccgcaggcattgaaagtttgacgaatctgtatgtcgattggcataagcaaacagag
gatatcgtttcaccggggagtgctcctccgctaccaccgttgccatctttaccatag
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