Ceratina calcarata (carpenter bee): 108632130
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Entry
108632130 CDS
T06061
Name
(RefSeq) gamma-aminobutyric acid receptor alpha-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal04080
Neuroactive ligand-receptor interaction
ccal04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108632130
04082 Neuroactive ligand signaling
108632130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccal04040
]
108632130
Ion channels [BR:
ccal04040
]
Ligand-gated channels
GABA-A
108632130
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
108632130
NCBI-ProteinID:
XP_017891959
UniProt:
A0AAJ7JF47
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MFAFIILLLVCTDGRENYAFDGEASRNSSRNAVATRGIVNDVVSKNITMVLENLLMNYEN
NQLPTHGKGTPTIVKTNILIRSMGPVSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLS
IKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFP
MDRQSCPLILGSYAYTSRQLVYEWQDSSSVNFVPGMTLSQFDLMGSPCRNLTFVRREGEF
SVLQVSFNLQRNTGYFLIQVYVPCVLIVVLSWVSFWIHREATSDRVGLGITTVLTLSTIS
LDSRTDLPKVKYATALDWFLLMSFGYCSATLLEFAGVHYFTKVGSGEIPLDEEDLTEEFE
TVGAAANGDYQNDFCGFVPCSPETVHPEITNIMDVERRERRNKSSSLICDVYDVDVSTNV
QEPVSYGRGRGSMTVSSVASKPSTMERQTQTDVWIPKWRQFIYCLTGDEDFRRKRQREAA
GNCKRQGENIARHINSVSSIDRVARVVFPASFGLLNVLYWVTYVSYQEDFKWQDPPLGSI
SNSVN
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcatttataatcctactgttggtgtgtactgatggtagagagaattatgccttc
gatggggaagcctcgcggaattcgtcgcgaaacgccgtagcaacgaggggaatcgtcaac
gacgttgtctcgaagaatataacgatggtcctagaaaatctgttaatgaattacgagaac
aatcaactgcccactcatgggaaagggactccgaccatcgtcaagactaatattttaatc
aggagcatgggccctgtttcggaattagatatggattattcgatggactgctactttcgt
caatcgtggcgtgactcgcgtctcagcttccttggcccgatcaaatcgttgagcctgagc
ataaaaatgttggaaagaatctggaggcctgatacttacttctacaacgggaaacacagt
tacgtgcacactataacggtgcctaacaaactgctccgaatatctcaggacggagacatt
ctttattcgatgagattaactataaaagcgaagtgtccgatggagttgaggaatttcccc
atggatcggcaatcttgcccgttgatcctcggcagctacgcttatacctcccggcaactg
gtgtacgaatggcaggacagttcgtcggtgaacttcgtccctgggatgacgttatcacag
ttcgatctaatgggttcgccttgtaggaatttaacgttcgtcaggagagagggcgagttc
tcggtgctacaagtctccttcaatctgcagaggaacactggatatttcttgatccaagtt
tacgtcccctgcgtgttgatagtcgtgctcagttgggtttcgttctggattcaccgggaa
gcgactagcgaccgagtcggattaggaatcaccactgtcttgacgttgtccacgattagc
ctggattcgaggaccgatttgcctaaagtgaaatacgcgaccgctctggactggttcctt
ctgatgagtttcggctactgcagcgctacgctgttggaatttgcaggggttcattacttc
acgaaggtagggagtggagagattcctttggatgaagaagatctcactgaggagttcgag
actgtcggagctgctgcgaatggtgattatcaaaatgatttctgcggcttcgttccctgc
agtcctgaaacggttcacccggaaatcacgaacataatggatgttgaaagaagggaaaga
cgaaataagagcagctccttaatttgcgacgtctatgatgtcgatgtaagcacaaatgta
caggagccagtgtcttacggcagaggaagaggttctatgacagtatcgtcagtggcctcg
aaaccatctacgatggaacgacagacacaaaccgacgtctggataccgaaatggagacaa
ttcatctactgcctcaccggcgacgaggacttcaggaggaagaggcagagagaagcagct
gggaattgcaaaaggcaaggagagaacattgccaggcacataaacagtgtgtcttccata
gacagagtcgcacgggtcgttttcccggcatcgttcggtttattaaatgtcctgtattgg
gtaacttacgttagttatcaagaagatttcaagtggcaggacccgccattaggctccata
tccaattcggttaattag
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