Ceratina calcarata (carpenter bee): 108632182
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Entry
108632182 CDS
T06061
Name
(RefSeq) pinin isoform X1
KO
K13114
pinin
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03013
Nucleocytoplasmic transport
ccal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108632182
03015 mRNA surveillance pathway
108632182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108632182
03041 Spliceosome [BR:
ccal03041
]
108632182
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108632182
Spliceosome [BR:
ccal03041
]
Complex C
Other components
EJC/TREX
108632182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
ArgoN
Motif
Other DBs
NCBI-GeneID:
108632182
NCBI-ProteinID:
XP_017892081
UniProt:
A0AAJ7NFN6
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MRKLDVQEAWGADRLEAQLEAARDGLRGLDRSIRKILGRDLPDGENGPIQPPPSRLSQKR
PLQEDRRRVVSDFVNNELPGGKRRWQGTNGEPKTVFSRLSARVPSNNDDSADEDDNVIKP
AVSSRVIATPREIPSRQEVIRRERIDERSRQRNKRMFGALLGTLQKFRQEETKLKAKEDK
KAEVEARVEEARRREKEELRRERQQLFLSRKRQLAEVRALEAKLARSRQFQDWRAAQLPL
ASFIKTRAQPPIYYIPKRKHPQTDLLLVQSAKELHEEIERREKALVEELELIEVQVGLGK
HQQNFDGSTTLSATTEVPQPTEEGEENRDPNPEKNSEPESNETTDVPVKSEMDETLEGAN
DLEKKEEVQVDEAKDENNG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaattagatgtacaagaggcctggggcgccgacaggttagaagcgcaactagaa
gcagctcgggatggtctccgagggcttgatcgaagcatcagaaagatcttgggccgggat
cttcctgatggagaaaacggtccgattcaaccaccacccagcagattatcacagaagagg
ccgttacaagaggatagacgacgggtcgtatcagattttgtgaataatgaattacctggt
ggaaagaggagatggcagggaacaaatggggaaccaaagacagttttcagtcggttaagt
gcacgtgtaccttccaataatgacgatagtgccgatgaagatgataatgtgatcaagcca
gctgtgtcttcaagagtgatagcaactccgagagaaattccatctagacaagaagttatc
aggcgcgagagaatagacgagcgtagcagacagaggaataaacgaatgttcggggcttta
ctaggtacattacaaaaatttcgacaggaggaaactaagttgaaagcaaaggaagataag
aaggcagaggtggaagcgagagtggaagaggccaggaggagagaaaaggaggaattgaga
cgagagaggcaacaattgtttttgtctcgtaaacgacagctggcggaagttcgggcactg
gaagcgaagttagcacgcagtcgacagtttcaagattggcgtgcggcgcaattgccactc
gcttcgttcataaagactcgagctcagcctcccatttactatatacccaaacgtaaacat
ccgcagaccgatctccttttggttcaatctgcgaaggagttgcatgaggagatcgagaga
agagagaaggcgttggtggaagaacttgaactgatagaagtacaagtaggacttgggaaa
catcaacagaacttcgacggatcgacgacgttaagtgctacgacggaagttccgcagccg
acggaggaaggggaggagaaccgcgatccgaatccggagaagaattcggagccagagagt
aacgagacgacggatgttcctgtgaagtccgagatggacgagactctcgagggcgcgaac
gatcttgagaagaaggaagaggtacaggtggacgaggcgaaggatgaaaataatggctag
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