Ceratina calcarata (carpenter bee): 108632698
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Entry
108632698 CDS
T06061
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X2
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccal03041
]
108632698
Enzymes [BR:
ccal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108632698
Spliceosome [BR:
ccal03041
]
Complex C
Other components
Complex C specific factors
108632698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
ABC_tran
Cas3-like_C_2
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
108632698
NCBI-ProteinID:
XP_017892913
UniProt:
A0AAJ7JGC5
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MNTKPVFSKPGDSMWQEDKPDIEAHSSTQFVYNANHSLALNMQRQRLPTFKYRSHIIYLL
EKYQTLVLIGETGCGKSTQLPQYLLESGWCSDGKMIGITEPRRVAATSLANRVADERNCI
LGTEVGYSIRFDNSTDETTKIKYMTEGILLRELMNDPLLTSYSVIVVDEVHERTLLTDII
MGLMKKIIRKRKSLRIVVCSATVDAEQLRDFFNTNVTKDSAKDTATILTVEGRLYPVDIF
YVQEPVANYVNSVVDTVLKIHEKGEPGDILAFLTGLDEVDQAVSLLSEHAKLIKEGKLKL
LPLAMYGSLPNSEQLKVFWRAAKDTRKVIVATNIAETSITIPNIVYVIDCGFVKIPWYET
ETQTNSLVIVPVSKASANQRAGRAGRTRNGEAYRLYTEEAYTDLFEATPPEMQRSDLAPA
ILQLKALGIDNVLRFNFPSAPPSKNLLAGLELLYALGAIDSNGELTTPLGVTMAEMPLEP
VFAKSLIVSGEMSCSEELSTILAMLQVQNVFIRPAGGQASIKARIAHRKFEVEEGDLLTL
LNVYTAYEKNSRTTSWCQQNFLNSKALRRTTEIRIQMHSMMKRLAIPLVSCNGNVEQILK
CITAGLFPKAAYLHYTGVYKTVRGNKDLYVHPNSCLYTLQQPQWVLFCEVLQTNKTYMKD
ITVIQPEWLLELAPHFYEKTALDSI
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaagccagtcttttcaaaacccggagacagcatgtggcaggaggataaaccg
gacatagaagctcattcctctacacaattcgtttacaatgcgaatcattcactcgcattg
aatatgcaacgccaaaggttacccacgttcaaatacagaagtcacataatttatttactg
gagaagtatcaaacgctggtcctgattggtgaaactggttgtggaaagagtacacaatta
cctcagtatcttctcgaatccggatggtgttcggatggaaaaatgatcggcatcacagaa
ccgagaagggtcgctgcgacttctttagctaatcgtgtcgcggatgaaagaaattgcatc
ttgggaacagaagtcggttattctatacgtttcgataactctacggatgagacgacaaag
ataaagtatatgacagagggtattctacttcgcgagttgatgaatgatccattgttaacg
agttactctgtaatcgtcgtggacgaagtacatgagagaactcttcttacagatattatc
atgggacttatgaaaaagattattaggaaacgtaaaagtttacgaatagttgtttgttcg
gcgactgtagatgccgaacagttaagggacttttttaacacgaacgtaacgaaggattcg
gcgaaggacacggcgactatactgacggtcgagggtagactttatcccgtggacattttt
tacgtgcaagaaccagtggctaattacgtaaacagtgtcgtcgacaccgtattgaaaatt
catgaaaagggagaacccggcgatatccttgcatttctgacgggcctagatgaggtagac
caggcggtctctttgttatcggagcatgccaagttaataaaagaaggcaaattgaaactc
ttgcctctggccatgtacggatcccttcctaattcggaacagttaaaagtattctggcga
gccgctaaagatactcgaaaagttatcgtagcgaccaacatagcggaaacctctattact
ataccgaacatcgtttatgtaattgattgcggcttcgtaaagattccttggtacgaaaca
gagacccaaacaaattcgttggtgatcgttcccgtttccaaagcctccgcgaatcaaagg
gccggtcgagctggtcgcactcgaaacggagaagcttacagactgtacacggaggaagcg
tatacggatttgttcgaggcaacgccgccggagatgcaacgatcagacctagctccagct
attttacaactgaaagctctgggaatcgataacgtgttgcggtttaattttccttccgct
ccgccaagtaaaaatctactagctggactggaattattgtatgcgcttggcgctatcgac
agcaatggggaattgacgacgccgttgggcgtaacgatggccgagatgcctttggagccc
gtttttgcgaaatcattgatagtgtcaggtgaaatgagctgttccgaagaattgtcgacg
atcttagccatgctgcaagttcaaaatgtttttatcagaccagccggcggacaagcctcg
ataaaagccagaatcgcacacaggaagttcgaggtcgaggaaggcgatctgttaacgcta
ctgaatgtttacacagcttacgagaaaaacagcaggacgaccagttggtgtcagcaaaat
tttttaaacagcaaagctttgaggaggactacggagattcgtattcaaatgcactccatg
atgaagagattggcgataccgcttgtttcttgtaatggaaacgtggaacaaatcttgaaa
tgcattactgctggacttttcccgaaagcggcttacttacattataccggggtatataaa
acggtaagaggcaataaggatctgtacgtacatccaaacagttgtttatatactctgcag
caacctcaatgggtgttattttgcgaggtcttgcaaacgaataaaacgtatatgaaggat
atcacagttatacaaccagaatggttgttagagttagcaccgcacttttacgagaaaacc
gcgctcgattctatttaa
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