Ceratina calcarata (carpenter bee): 108632923
Help
Entry
108632923 CDS
T06061
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108632923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccal03041
]
108632923
03009 Ribosome biogenesis [BR:
ccal03009
]
108632923
Enzymes [BR:
ccal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108632923
Spliceosome [BR:
ccal03041
]
Complex A
U1 snRNP components
U1 related factors
108632923
Complex B
108632923
Ribosome biogenesis [BR:
ccal03009
]
Eukaryotic type
Pre-60S particles
Helicases
108632923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
PRAI
Motif
Other DBs
NCBI-GeneID:
108632923
NCBI-ProteinID:
XP_017893293
UniProt:
A0AAJ7NFW2
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MAYRDRERGDRRGGGARGGGRFGGRDASVGGRFGSNSNRDSSFGNSNFKNRQPGERLRKP
RWDMSTLQPFRKDFYQPHPNVTTRTSHIVEAYRSDKEITVKGTNVPGPNIYFEEGGFPDY
VLTEIRRQGFGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINHQPRLNR
SDGPIALILAPTRELAQQIQQVASDFGVSSQVRNTCIFGGAPKGPQARDLERGVEICIAT
PGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPK
EVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVCEEYEKESKLMKLLEEISNEPENKT
IIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQERDYVLNQFRNSRSAILVATDVAARG
LDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKANDLIQVLEEAK
QVVNPKLYELSKNPGVYKRGRYGGRSGGGGGRGSGGRGGGSRGSRGGRDGDRGGRFDRSN
GSGGDRGKWNGNSSNMASNKNIGMGGGSYSSKAFSQNSYGGPSGGGSSGYSQNGGYGGSG
GGGSNYRQNGY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcttaccgtgatcgtgaacgtggcgacagaaggggtggtggagccaggggaggtggt
cgcttcggtggacgagatgcgagcgttggaggaagattcggtagtaactctaacagagac
agtagttttgggaacagtaattttaaaaaccgacaacccggtgaacgtttacgcaagccc
agatgggatatgagtacactgcagccatttagaaaagatttttatcaacctcatcccaat
gttacaactcgaacgtctcacatagtcgaggcataccgttcagacaaggaaatcactgtg
aaaggcacgaatgtaccagggccgaacatatatttcgaagaaggcggatttccagactac
gttttaaccgaaatccgtagacaaggttttggtgagccaactgcgattcaagctcaaggt
tggccaattgccttgtctggacgtgacatggttggaatcgctcagactggatctgggaaa
acattagcatatattttaccggcaattgtacacataaatcaccaaccgagattgaacaga
agtgacgggcccatagctctcattctagcacccacaagagaactcgcacagcagattcaa
caagtcgcgtcagacttcggtgtttcctcgcaagtaagaaacacttgcattttcggtgga
gctccgaaaggtccgcaggctcgtgatcttgaaagaggagtcgaaatttgcatagcaaca
cctggacgtcttattgactttttagagcgtggcacaacaaatttacgtaggtgcacgtac
ttagtattagatgaggctgataggatgctcgatatgggcttcgagccacagattagaaag
atcgttgaacaaatccggcctgacagacagacccttatgtggtcggcaacatggccaaag
gaagtacgcaatctggctgaagaatttttaaccgactatatacaaattaacattggctcg
ctgcaattagctgctaatcataacattctccaaatcgtcgacgtatgcgaagaatacgag
aaggagagtaagctcatgaagttgttggaagaaatttcgaacgagcccgagaacaagacg
atcatatttgttgaaaccaagaggaaagtagatgatataacgcgcgcgataaataggtac
ggctggcaagcaattggcatccatggggataaaagtcaacaggaaagagattacgtatta
aatcagttccggaatagcagatctgccattctagtagctacagacgttgcagcaagagga
ttagatgtggaggatgttaagtttgtgataaatttggattacccgtcgaattcggaagac
tatgtacaccggatcggtcgaacggggcgttcgcagcgtacaggaaccgcgtacgcattt
ttcactccgggtaacgcacacaaagctaacgacttgatccaagttctcgaggaagcgaag
caagtcgtgaacccgaaactgtacgaattatcaaagaatccaggcgtttataaaagaggt
cgttacggcggacgtagtgggggtggtggcggtcgtggttccggcggccgtggcggtggt
tccagaggttccagaggtggtcgcgatggagaccggggtggtcgatttgaccgttccaat
ggtagtggaggtgatcgaggaaagtggaatggaaatagtagcaatatggcttcaaataaa
aatataggtatgggcggaggcagttacagtagtaaagcattttctcagaacagttacggt
ggaccttccggtggtggctccagtggttacagtcagaacggtggatatggtggaagtgga
ggtggcggaagtaattatagacaaaatggttattaa
DBGET
integrated database retrieval system
