Ceratina calcarata (carpenter bee): 108632955
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Entry
108632955 CDS
T06061
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccal03016
]
108632955
Enzymes [BR:
ccal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
108632955
Transfer RNA biogenesis [BR:
ccal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108632955
Prokaryotic type
108632955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
R3H
Motif
Other DBs
NCBI-GeneID:
108632955
NCBI-ProteinID:
XP_017893337
UniProt:
A0AAJ7JI71
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MSEMQNTNTNPDSSSKSREVKGEHPRNKYQKDYRKDYRSNNDFRRNRNSYNTGYRNDNFG
KKPYKRNWSNTQQDGKRKKLEVGNRLRECDVGITEFIGDEGFFGVIKERYTDFHVNEIAL
DGEIAKLTNQDIPTDEIENESEEDLKKMVSDVVREQLQSLKEPNASSIEIDVTDMDKTQR
KAIHTIAKRMTNVGSQTIDKDKKKILMLFPNKGTRNTNFNFRMDTRADWKKRGEYCYFIL
HKVNMDTMDALNQLAMNLRLRPNNFNYAGTKDRRAWTAQWVSLRKVEPADILRAAKNIRG
AYVGNFKFDNEPLKLGMLSGNHFKIALRNVSGTDEQIEKTMISLRDHGFINYYGLQRFGT
VRAIPTYDIGKALLQGKWNEAIELILKPREGEQDQDLVEARKIYETTKDAGAAYRRIKRC
DKIEATLLKGLCESGNNNPQGALDSIPRNARLMYIHAYQSFVWNHMVSKRIKEFGRKPIV
GDLVYANSIKCDDNEEEFVCDNEDEPVAENNPGTNEMENRPEKEEGINAQIPDTSTESNT
LIKEVTDATECCLKIDEAKEENKTTNDKDQNEDLRNLPPVKVLTEEDLPHYTLADVIMPQ
VGWKVTYPPYAKPWLDEFLAKDGLTTDLRQKNKKYSLGGAYRKILQIPSSVSWRIMHYKE
KYNDLLMSDISEMRQYVAPKDDPEGQYKALILEMSLKSSTYATMALREILKSDTSPQAQA
AQSAVCNAEAENTNKSEEPSESENKTQDEDKNVQEVNMTQDDHKNIQEVNMTQDDDKNVQ
DENMTQNDDKNVQEENMMQDDKNVQEENMTQSDDKNVQEQEAADQMEVSEAI
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaatgcagaatacaaatactaaccctgacagcagttctaaaagccgagaagtt
aaaggagagcatccacgtaacaaatatcaaaaagattacagaaaagattatcgttcaaat
aatgatttcagaagaaataggaattcgtataatactggataccggaacgataattttggc
aaaaagccttataaacgtaactggtcgaatacccaacaagatgggaagaggaagaagttg
gaagttggaaatcggcttagagagtgcgatgtcggtattaccgaatttataggagacgaa
ggatttttcggcgtgatcaaagaacgatacacagattttcatgtcaatgaaatagcactt
gatggggagatagccaagttgacaaaccaagacattccaacagatgagattgaaaatgaa
agtgaagaagatctgaaaaagatggtatcagatgttgttagggaacagttacagagcttg
aaagaaccaaacgcatcaagtatagaaattgatgtaacagacatggataaaactcaacgt
aaagcgatccacacaattgctaaaaggatgacaaatgttggtagccaaactatagacaaa
gacaaaaagaagatattgatgcttttcccaaataaaggaactagaaatactaatttcaat
tttcgaatggatactagagctgattggaaaaaaagaggggaatattgttacttcatatta
cataaagtgaatatggatacaatggacgctttgaatcaactagctatgaatttacgtttg
agaccaaataatttcaattatgctgggactaaagatcgtcgggcttggaccgctcagtgg
gttagtttgaggaaggtagagcctgcagatatattaagagcagcgaaaaatattcgcgga
gcatacgtggggaatttcaaattcgataatgaacctttgaagttaggcatgctcagtggt
aatcactttaaaatcgctctaagaaatgtcagtggaactgatgaacaaattgaaaagaca
atgatatcactgagagatcacggatttataaattattacggtttgcaaaggtttggcact
gtacgtgctattccaacttatgacataggcaaagcattgcttcaaggcaaatggaatgag
gcaattgaattgattttaaaacctagagagggagagcaagaccaggatcttgtagaagct
cgaaaaatatatgaaaccaccaaagatgctggtgctgcttacagaagaattaaaagatgt
gataaaatagaagctacacttttaaaaggactctgtgagtccggtaacaataatcctcag
ggtgctctcgattcaatcccgcggaatgctcgattaatgtatatccacgcttatcaaagc
ttcgtttggaatcacatggtgtcaaagaggataaaagaatttggaaggaaacctatagtg
ggagatttagtgtatgcaaacagtataaagtgtgatgataacgaagaggagttcgtttgc
gataatgaagatgaacctgttgctgagaataatccaggaactaacgaaatggagaataga
cctgaaaaggaagaaggtataaatgcgcagatacctgatacatccacggaatccaatact
ttgattaaagaagtaacagacgccacagagtgttgccttaaaatcgatgaagccaaagaa
gaaaataaaacaactaatgacaaagaccagaatgaagatctacgtaaccttcctccagtt
aaagtacttacagaagaggatttgccgcactatactttggcagatgtaataatgcctcag
gttggttggaaagtcacatatccaccttatgcaaaaccgtggctcgatgaatttttagca
aaagatggactgactaccgatctcaggcagaaaaataaaaaatatagtttaggaggcgct
tataggaaaatattgcaaatcccttcgagtgtatcctggagaataatgcattacaaggaa
aaatataacgatcttcttatgtccgatatcagtgaaatgagacaatacgtggctcccaaa
gatgatccagagggccaatataaagctttaattctcgaaatgtctctaaaatcttctaca
tacgcgactatggcattgcgtgaaattctgaagtctgatacttcgccgcaagcacaggca
gctcagtctgctgtatgtaacgccgaggcagaaaatacaaataaatcagaagagccttca
gagagtgaaaataagacccaggacgaggataagaatgttcaggaggtaaatatgacgcaa
gatgatcataagaatattcaggaagtaaatatgacgcaagatgatgataagaatgttcag
gacgaaaatatgactcagaatgatgataagaatgttcaggaagaaaatatgatgcaggat
gataagaatgttcaggaagaaaatatgacccagagtgatgataagaatgttcaggaacaa
gaagcagcagatcagatggaagtatctgaagcaatatga
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