Ceratina calcarata (carpenter bee): 108632967
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Entry
108632967 CDS
T06061
Name
(RefSeq) ran GTPase-activating protein 1 isoform X3
KO
K14319
Ran GTPase-activating protein 1
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108632967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108632967
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108632967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
RanGAP1_C
LRR_4
Nop14
CDC45
Motif
Other DBs
NCBI-GeneID:
108632967
NCBI-ProteinID:
XP_017893353
UniProt:
A0AAJ7JH55
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MQLAIDDNLNGMSLFDLNEIGNQLRKVAQSDDAGTGVSFANKSLKLDTEQDALTIVEAIR
TCPNLEYLDLEGNTLGPHAAKAVAKALKDNGSTLKRALWKDMFTGRLKSEIPKSLEYLGN
ALCTAGTRLYELDLSDNAFGPIGIQGLANFLTSDTCYSLRVLRLNNNGLGICGGEMLAKA
LSDCYDNSCRAGSPPLALKVFVAGRNRLENDGAKALASVFQKLTTLEEVVMPQNGICHPG
ITALANGLSSNPGLRILNLNDNTVGFKGAQAIAKALPNFKNLEQLNLGDCLLKTKGSIAL
TQALGVEGNYPLLAELNLSFNEIRSRGAILIANAMADKQQLVSLQLDGNVFGKTGRAALR
DSLRMSGRIDSLGTLDEDESGNENETDENEEGLEENEDEEQEEEELDEEEDEYEDEDEDE
NDDVELGVMEEEERVVVLGEERNDRKGNSGRIANGNVTRSATVSVVEFLKSPTGEKLLLL
EKNAVEEFVNEAKNLSKNADASSELRFVEEFTKIVMKVSAFSTSGYVDIRTKANHLTDAL
YFKLCSFAVENDQTSVWNNALLVNLGLIKAEDKKSGKIDWNLEGCFKALEMVSQKDYFLE
ETRNTLKLFLEKPVKTSRTKVGIDSFQDIKDSLKAVLSHTQSISNNY
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggctatcgatgacaacttgaacgggatgtctttgttcgatttgaatgaaatt
gggaatcagttgaggaaggtcgcccagagcgatgatgccggcaccggtgtgtctttcgca
aacaaatcgctgaagcttgataccgaacaagacgcgttgacgatcgttgaagcaatacga
acatgcccaaatctcgagtacctggatttggaaggaaatacattaggaccgcacgctgcc
aaagctgtggccaaggcacttaaagacaatggttccacgttgaaacgtgctctatggaag
gatatgtttactggccgtttaaagtcggaaatacctaaatctctcgaatatcttggcaat
gctctgtgtaccgcgggcactcgtctttacgaacttgatttgagtgacaacgctttcggt
cctatcggaatccagggattggcaaattttctaacatctgatacgtgctattctctccgt
gtgttaagattaaataacaatggactcggaatatgtggtggcgaaatgttggcaaaagca
ttgtcagattgttacgacaacagttgtcgagcaggatctcctcctttggcattgaaagta
ttcgttgctggaagaaacagactagagaacgatggtgccaaagctctggcatcagttttc
cagaaattaaccacgttggaagaagtggttatgcctcagaatggtatatgtcacccaggc
ataacggcgcttgccaatgggttgtcttctaaccctggactacgaattttaaatctcaac
gataacacagtgggttttaagggagctcaagcgatcgccaaagcgttaccgaatttcaaa
aatttggagcaacttaatctcggcgattgtctactgaaaactaaagggagcatcgcattg
acgcaagcgttgggagttgagggcaattacccgttacttgccgaacttaatttgagtttt
aacgaaatccgctcgagaggcgccattctcatagccaacgctatggctgataagcagcaa
ttggtatctttacaattggacggaaacgtctttggcaaaacgggtcgtgctgctttgcgt
gactcccttcgaatgtccggaaggattgactcgttgggtacgctcgacgaagacgagagc
ggcaatgaaaacgagacggacgaaaacgaggagggattggaagaaaacgaagacgaggaa
caggaggaggaagagcttgatgaggaagaggatgaatacgaggatgaagacgaggacgag
aacgatgatgtagaactgggagtgatggaggaagaggagagggtggtggtactgggagaa
gagcgaaacgacaggaaaggaaatagtggcagaatcgcgaatggtaatgtcacacgatcg
gccacggtatccgtagtggaatttttaaaatcaccaacgggagaaaagttgttactattg
gaaaagaacgccgtggaggagtttgtaaatgaagccaagaatctgtcaaaaaatgccgat
gcatcatcggaattaaggttcgtggaagaatttacgaaaattgttatgaaggtatcggca
ttcagtacgagcggttacgtcgatatcaggacgaaggctaatcatctcacagatgccctg
tatttcaagttatgttccttcgcagtggaaaatgatcagacttcggtctggaataacgct
ttactggttaacttaggtttaataaaggccgaagataaaaaaagtgggaagatcgactgg
aatctggaaggttgtttcaaagctttggaaatggttagtcaaaaagattattttctagaa
gaaacacgaaacacattgaaattgtttttggaaaagccagttaaaacgagtagaacgaaa
gttggcatagattcgtttcaggatataaaagattcccttaaagctgtattaagtcataca
caaagcataagtaataattattga
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