Ceratina calcarata (carpenter bee): 108633152
Help
Entry
108633152 CDS
T06061
Name
(RefSeq) uncharacterized protein LOC108633152
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccal03041
]
108633152
Enzymes [BR:
ccal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108633152
Spliceosome [BR:
ccal03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
108633152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
AAA_19
Motif
Other DBs
NCBI-GeneID:
108633152
NCBI-ProteinID:
XP_026666874
UniProt:
A0AAJ7RW83
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MSQNIAHDVNKKPRTKDIRIQENVTFFQMGFSQKILDGLCTCGFQRPSPIQLKAIPLGRV
GFDLIMRAKSGTGKTLVFSVISLEMVDIEISSIQVLVLAPTREIAVQIAHVFSSVGCEIK
GLKVEVFIGGIAIEGDKKKLKDCHIAVGAPGRIRHLVEKGFLKVDNVRLFVFDEADKLME
VSFQKDINYIFSKLPLNKQIIASSATYPGDLETFLQTYMCSPVVVSPDNDESILIGLRQF
VTIVSSHPNAMKQVQIKVDELTKIFYKIPFKQSLVFSNYQSRAQSVCNKINSMGLQATFI
AGNQDMNKRLEAINKLKNFKCRILLTTDLTARGIDADNVNLVVNLDLPVDAPTYLHRIGR
AGRYGSYGISITIIAENELETFQQLLTHVGGPTFYVLKLPAEYPDDIWSVPSTEYEKLCA
KSDSNENQIEINSVAEVKNNSTTVIDADLPNKIKSETNETSDGTNKEDTIDKNCSNEKET
KNDIVKHVNDLHNSHLQELTLEKIEVSSLFVDGTIVINKFEDIQENKKVDKKKTASYSLS
KPKVIHTFKLDFPENNLSTWQKNNENVVFEVDLTDVQEDDLSSCDIDIITEYVKYNVDSE
HVEENSSTYDVDTNSCLTTVPDEMQKTHCIGNNGPIDNLTNKIKNDANTTFLNELNHYLA
HYYTKNLNTVQSKSYLNDEETVKEALSWKQKLDFEIKLLDNALQSTTESIQKLIYQEHFR
MLRIFYKIQKQALLCVYPEIRNDDEIDDTYSYCVSSGDSNVLQMYKTIEDFKSIHRRPGE
KFKAYFPYPVKEDSYMPNLMISETDAKDYLNALRYLHSNPDPRKKLLEIIDYVAFLDEAK
QRSILERLKNDSEIISVDDLLARIKSLDLNKETEDNSTEQQRADTDETANLVSHNESPNA
ENVNNINEQNVIVNENIRNNVSSSSSNDSTLTESDDSIEKESVPRENVYSSTSSTLSSEN
NDDNKSKEKAYAKNNFRKCRKFSKRNKLVKDKEQYLYDDTFECNYISYEKIDRLSDNIDE
CEKKCQPQKQLKSSSKSVRCSLSSMKSNLYSNKEESNIQESRAYNERQNSDFSSNKNQKP
VTQYYAPFYNYTNNVPCTTETENHACSLNNYSNPSFSRNTYPSNENETSEIEQFLSSLRI
ETDQFHLELYKSEMFHNSTKHDYD
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaatattgcacatgatgttaataaaaagccaagaacaaaggacattagaata
caagagaatgttacatttttccaaatgggattttctcaaaagattttggacggattgtgt
acatgtggttttcaaaggccttctcctatacaattgaaggcaattccattaggaagagtt
ggttttgacttgataatgcgtgctaagtcaggaactggaaagactttagtatttagtgta
atatcacttgaaatggttgatattgagatatcatctatacaagtgttagtattggcacct
actcgagaaattgctgtacaaattgctcatgtcttctcatctgtaggttgtgaaattaag
ggtttaaaggttgaagtcttcataggaggaatagctatagaaggggacaaaaagaagtta
aaagattgccatatagctgttggtgcgccaggtcggattagacatttggttgaaaaaggc
tttttaaaagttgataacgttcgattatttgttttcgatgaggcggataaattaatggaa
gtcagttttcaaaaggatattaattacatcttctcaaaattaccattgaacaagcaaatt
atagcatcaagtgctacttatcctggtgatttagaaacatttttacaaacctacatgtgt
tccccggttgtagtatctccggacaatgatgaatcaatacttatcggtctccggcaattt
gtaacaatagtctcgtcacatccgaatgctatgaaacaggttcaaataaaggtagatgaa
ttgacaaaaatattttataaaattccatttaagcaaagtttagtgttttcaaactatcag
tcacgggctcaatcagtgtgtaataaaattaattccatgggattacaagcaacctttatt
gctggaaatcaggatatgaataaaaggctcgaagccattaataaattaaaaaattttaaa
tgtagaatattgttgacgaccgatttgactgcgagaggtatagatgcggacaatgtaaat
ttagttgtaaaccttgatttacccgtagatgcgccaacgtacttgcacagaataggcaga
gctggacgttatggatcttacggaatttcaataacgataattgcagaaaacgagctcgaa
acgtttcaacagttgttaacgcacgtaggaggtccaacgttttacgtattgaaactccct
gcagagtacccagatgatatatggtctgtgcctagtacagaatacgaaaaactttgcgcg
aaatcagacagcaatgaaaatcagattgagattaattctgtcgctgaagtaaaaaataac
tccacgactgttatcgatgccgatctaccgaataaaataaagtcagagacgaatgagaca
tcagatggcacaaacaaggaagatacgattgacaagaattgttctaatgagaaagaaaca
aagaatgatatagttaaacacgttaatgatctccataattcccatttacaagagcttacc
ttagaaaagatagaagttagttctttatttgtggacggcactatcgtaataaacaagttt
gaagatattcaagaaaataagaaagtagataagaaaaagactgcatcatatagtttgtcc
aaaccaaaagttatacatacctttaaattagattttcctgaaaataatctctctacttgg
cagaagaataatgaaaatgtagtattcgaagttgatttaacagatgttcaagaagacgat
ttatcgagctgcgatattgatataattactgaatatgtgaaatataatgttgatagtgaa
catgttgaagaaaattcttcaacctatgacgtggatactaattcatgtcttactactgta
cctgatgaaatgcagaagactcattgtataggaaataacggtccgattgataatctgacg
aataaaattaaaaatgatgcgaatacaacatttttgaatgaactgaatcattatcttgcg
cattattatacaaagaatttgaatacagttcagagtaaatcatatttaaatgatgaagaa
acagtaaaagaggcgcttagttggaaacagaaacttgattttgaaataaaactgttagat
aatgcactgcagtcaacgacggaatccattcaaaaattgatataccaagaacactttcga
atgcttagaatattttacaaaatacaaaaacaggcactcttgtgcgtttatccagagata
cggaatgacgatgaaatagacgatacttattcatactgcgtaagttccggggattcgaat
gtacttcaaatgtataaaacgatagaagattttaaaagtatccatcgaagacctggagag
aaatttaaagcatattttccatatcctgttaaagaagactcgtatatgccgaatttgatg
atatccgaaactgatgccaaagattatcttaacgctttgcgatatttacattcgaaccca
gatcccagaaagaagttattagaaataatagattacgtggcgtttttagatgaagccaaa
caacgtagtattctagaaagactaaaaaatgattccgaaattatttcagtcgatgattta
ctggcgagaataaaaagtttagatttaaacaaagaaacagaggacaactctacggaacag
caaagagctgacactgatgaaactgcaaatttagtttcgcacaatgagtctcctaatgct
gaaaatgtgaataacatcaatgagcaaaacgtaattgtaaatgaaaacataagaaataat
gtgagtagcagcagttctaatgattcaacgttaaccgaatcggatgattctattgaaaaa
gaatctgtgcctcgcgaaaatgtatacagtagcacatcaagcactctttcaagtgaaaat
aatgacgataacaaatctaaggaaaaagcatatgcgaagaataattttcgtaaatgcaga
aagttttcaaaaagaaataagctggttaaagataaggaacaatacttatatgatgataca
tttgaatgtaattatatttcgtatgaaaaaatcgatagactatccgataacattgatgaa
tgtgagaagaaatgtcaacctcagaagcaattaaagtcatcatcgaaatccgtgcgatgt
agcttaagctcaatgaagtcaaatttgtactcgaataaagaggagtcaaatattcaggaa
tcacgtgcatataacgaacggcagaattctgatttttcttccaacaaaaatcaaaagcct
gtaacgcaatattacgcaccattttataattatacgaataatgttccttgtactactgaa
acggaaaatcatgcatgttctcttaataattattcaaatccttctttttcgagaaacact
tatccatcaaatgaaaacgaaacgagcgaaattgagcagtttttatcatctttgaggatt
gaaacagatcaatttcatttagaattgtacaaatcagaaatgtttcataattcaacaaag
cacgattacgattaa
DBGET
integrated database retrieval system
