Cupriavidus campinensis: M5D45_00915
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Entry
M5D45_00915 CDS
T08350
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ccam
Cupriavidus campinensis
Pathway
ccam00300
Lysine biosynthesis
ccam00470
D-Amino acid metabolism
ccam01100
Metabolic pathways
ccam01110
Biosynthesis of secondary metabolites
ccam01120
Microbial metabolism in diverse environments
ccam01230
Biosynthesis of amino acids
Module
ccam_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ccam00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M5D45_00915 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M5D45_00915 (dapF)
Enzymes [BR:
ccam01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
M5D45_00915 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
DUF4514
Motif
Other DBs
NCBI-ProteinID:
URF04457
UniProt:
A0AAE9HZ43
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All DBs
Position
1:complement(211175..212041)
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AA seq
288 aa
AA seq
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MKLQFTKMHGAGNDFVVLDGIHQTLDLTEAQWRALASRHFGVGADQILIVEKSTRPDVDF
RYRIFNADGGEVEHCGNGARCFVRFVTDKGMTDKRSVRVEVMNGVITLTLQDDGQVTVDM
GAPELTPARVPFLPEGLPTRREGDDTLYGLEVNGRTAWITPVSMGNPHAVQIVDDTEQFP
VLQDGPVIEHHQTFPKRVNAGFMQIVDRGTVRLRVFERGAGETLACGTGACAAVVAGIRR
GLLDSPVKVHTHGGDLTIAWDGAGQPVRMTGPATTVFEGTIDLAALNA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccagttcaccaagatgcacggcgccggcaacgacttcgtcgtgctggacggc
atccaccagacgctcgacctgaccgaggcccagtggcgcgcgctcgccagccggcacttt
ggcgtgggcgcggaccagatcctgatcgtcgagaaatcgacgcgcccggacgtggacttc
cgctaccggatcttcaatgccgatggcggcgaggtggagcattgcggcaacggcgcgcgc
tgcttcgtgcgctttgtcacggacaagggcatgaccgacaagcgctcggtgcgcgtggag
gtcatgaacggcgtgattacgctgaccctgcaggacgacggccaggtcacggtggacatg
ggcgcgcccgagctgacgccggcacgcgtgccgttcctgcccgagggcctgccgacgcgc
cgcgagggcgacgacacactctacggcctcgaggtgaacggccgcacggcgtggatcacg
ccggtgtcgatgggcaacccgcacgcggtgcagatcgtggacgataccgagcagttcccg
gtgctccaggacggcccggtgatcgaacatcatcagacgtttccgaagcgggtgaacgcc
ggcttcatgcagatcgtggaccggggcaccgtgcggctgcgcgtgttcgagcgcggcgcc
ggcgagacgctggcctgcggcacgggcgcctgcgcggccgtggtggccggcatccggcgc
ggcctgctggactcgccggtcaaggtccacacccatggcggcgacctgaccatcgcctgg
gacggcgcgggccagccggtgcggatgaccggcccggcgaccaccgtgttcgaaggcact
attgaccttgccgcactgaacgcgtga
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