Cupriavidus campinensis: M5D45_05050
Help
Entry
M5D45_05050 CDS
T08350
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ccam
Cupriavidus campinensis
Pathway
ccam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M5D45_05050 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccam03400
]
M5D45_05050 (uvrB)
DNA repair and recombination proteins [BR:
ccam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M5D45_05050 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M5D45_05050 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
UvrD-helicase
Kinesin
AAA_16
Sigma70_ner
DUF348
Microtub_bd
GvpG
Mcf1_ABD
Motif
Other DBs
NCBI-ProteinID:
URF05199
UniProt:
A0AAE9I124
LinkDB
All DBs
Position
1:1092060..1094135
Genome browser
AA seq
691 aa
AA seq
DB search
MTNLAEVAPVLDEDKFVTFPGSPFQLYQPFPPAGDQPEAIRQLVEGVEDGLSFQTLLGVT
GSGKTFTMANVIARMGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDTIIVATVSAIYGIGNPSEYHKMILTL
RTGDKLSQRDIIARLIAMQYTRNETDFQRGTFRVRGDTLDIFPAEHAEMAVRVELFDDEV
DSLQYFDPLTGRVRQKIPRFTVYPSSHYVTPRETVLRAIEDIKVELRERLDFFYKENRLV
EAQRLEQRTRFDLEMLSELGFCKGIENYSRHLSGAKPGEPPPTLVDYLPPDALMFLDESH
VLIGQLNGMYNGDRARKTTLVEYGFRMPSALDNRPLKFDEFERKMRQVMFVSATPAQFEK
DHAGQVVEQVVRPTGLVDPIIMVRPATTQVDDLLSEINIRVQAGDRVLVTTLTKRMAEQL
TEFLSENGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILD
ADKEGFLRAERSLIQTIGRAARNVNGTAILYADRMTDSMKRAIDETERRRIKQIAHNEAH
GITPRGVVKRIKDIIDGVYDPNEVRAELSAAAERAKYEDMSEKQVAKEIKRLEKQMLDHA
KNLEFEKAAQVRDQLAKLRAQVFGAGGDHIL
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatctcgccgaagtcgccccggtcctggacgaagacaaattcgtcacctttccg
gggtcgccgttccagctctaccagccgttcccgcccgccggggaccagcccgaggccatc
cgccagcttgtggagggcgtcgaggacggcctgtcgttccagaccctgctgggcgtgacc
gggtccggcaagaccttcaccatggccaacgtcatcgcacgcatggggcggccggccatc
gtctttgcgccgaacaagacacttgcggcccagttgtactcggagttccgcgagtttttc
ccgcgcaacgccgtcgagtacttcgtcagctactacgactactaccagcctgaggcctac
gtgccgcagcgcgacctgttcatcgagaaggactcgtcgatcaacgagcatatcgagcag
atgcggctgtcggccaccaagagcctgctcgagcggcgcgacacgattatcgtggcgacc
gtctccgcgatctacgggatcggcaatccgagcgaataccataagatgattctgacgttg
cgcaccggcgacaagctgagccagcgcgacatcatcgcgcggctgatcgccatgcagtac
acgcgcaacgagaccgatttccagcgcggcaccttccgcgtgcgcggcgacacgctcgac
atttttcccgccgagcacgccgagatggccgtgcgcgtggaactgttcgacgacgaggtc
gattcgctccagtacttcgaccccctgaccgggcgcgtgcgtcagaagattccgcgtttc
acggtctacccgtcgagccactacgtcacgccgcgcgagaccgtgctgcgcgcgatcgag
gacatcaaggtggagttgcgcgagcggctcgatttcttctacaaggagaatcgtctcgtg
gaggcgcagcggctggagcagcgcacgcgcttcgacctggaaatgctctcggagctgggc
ttctgcaagggcatcgagaactattcgcggcacctctccggcgccaagccgggcgagccg
ccgccgacgctggtggattacctgccgccggacgcgctgatgttcctcgacgagtcccac
gtgctgattggccagctcaacggcatgtacaacggcgaccgcgcgcgcaagaccacgctg
gtggaatacggtttccggatgccgtccgcgctggacaaccggccgctgaagttcgacgaa
ttcgaacgcaagatgcgccaggtgatgttcgtctcggccacgccggcgcagttcgagaag
gaccacgcggggcaggtggtggagcaggtggtgcggccgaccggcctggtcgacccgatc
atcatggtgcgcccggccacgacccaggtggacgatctgctatccgagatcaacatccgc
gtgcaggccggcgaccgcgtgctggtgaccacgctgaccaagcggatggccgagcagctg
accgaattcctgtccgagaacggcgtcaaggtgcgttatctgcactcggacatcgacacc
gtggaacgcgtggagatcatccgcgacctgcgcctcggcaccttcgatgtgctggtgggg
atcaacctgctgcgcgagggcctcgatattcccgaggtgtcgctggtggccatcctcgat
gcggacaaggagggcttcctgcgcgccgagcgctcgctgatccagaccatcggccgcgcc
gcccggaacgtcaatggcaccgccatcctctatgcggaccgcatgacggactcgatgaaa
cgcgcgatcgacgagaccgaacggcgccgcatcaagcagattgcccataacgaggcccat
ggcatcacgccgcgcggcgtggtcaagcggatcaaggacatcatcgacggggtgtacgac
ccgaacgaggtccgcgcggagctgagcgccgccgccgagcgcgcgaaatacgaggacatg
agcgagaagcaggtcgcgaaggagatcaagcggctggagaagcagatgctcgaccatgcg
aagaatctcgaattcgagaaggccgcccaggtgcgcgaccagttggccaagctgcgggcc
caggtgttcggggcgggcggcgatcacatcctatag
DBGET
integrated database retrieval system