KEGG   Cupriavidus campinensis: M5D45_05050
Entry
M5D45_05050       CDS       T08350                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
ccam  Cupriavidus campinensis
Pathway
ccam03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    M5D45_05050 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccam03400]
    M5D45_05050 (uvrB)
DNA repair and recombination proteins [BR:ccam03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     M5D45_05050 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      M5D45_05050 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H UvrD-helicase Kinesin AAA_16 Sigma70_ner DUF348 Microtub_bd GvpG Mcf1_ABD
Other DBs
NCBI-ProteinID: URF05199
UniProt: A0AAE9I124
LinkDB
Position
1:1092060..1094135
AA seq 691 aa
MTNLAEVAPVLDEDKFVTFPGSPFQLYQPFPPAGDQPEAIRQLVEGVEDGLSFQTLLGVT
GSGKTFTMANVIARMGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDTIIVATVSAIYGIGNPSEYHKMILTL
RTGDKLSQRDIIARLIAMQYTRNETDFQRGTFRVRGDTLDIFPAEHAEMAVRVELFDDEV
DSLQYFDPLTGRVRQKIPRFTVYPSSHYVTPRETVLRAIEDIKVELRERLDFFYKENRLV
EAQRLEQRTRFDLEMLSELGFCKGIENYSRHLSGAKPGEPPPTLVDYLPPDALMFLDESH
VLIGQLNGMYNGDRARKTTLVEYGFRMPSALDNRPLKFDEFERKMRQVMFVSATPAQFEK
DHAGQVVEQVVRPTGLVDPIIMVRPATTQVDDLLSEINIRVQAGDRVLVTTLTKRMAEQL
TEFLSENGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILD
ADKEGFLRAERSLIQTIGRAARNVNGTAILYADRMTDSMKRAIDETERRRIKQIAHNEAH
GITPRGVVKRIKDIIDGVYDPNEVRAELSAAAERAKYEDMSEKQVAKEIKRLEKQMLDHA
KNLEFEKAAQVRDQLAKLRAQVFGAGGDHIL
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgacgaatctcgccgaagtcgccccggtcctggacgaagacaaattcgtcacctttccg
gggtcgccgttccagctctaccagccgttcccgcccgccggggaccagcccgaggccatc
cgccagcttgtggagggcgtcgaggacggcctgtcgttccagaccctgctgggcgtgacc
gggtccggcaagaccttcaccatggccaacgtcatcgcacgcatggggcggccggccatc
gtctttgcgccgaacaagacacttgcggcccagttgtactcggagttccgcgagtttttc
ccgcgcaacgccgtcgagtacttcgtcagctactacgactactaccagcctgaggcctac
gtgccgcagcgcgacctgttcatcgagaaggactcgtcgatcaacgagcatatcgagcag
atgcggctgtcggccaccaagagcctgctcgagcggcgcgacacgattatcgtggcgacc
gtctccgcgatctacgggatcggcaatccgagcgaataccataagatgattctgacgttg
cgcaccggcgacaagctgagccagcgcgacatcatcgcgcggctgatcgccatgcagtac
acgcgcaacgagaccgatttccagcgcggcaccttccgcgtgcgcggcgacacgctcgac
atttttcccgccgagcacgccgagatggccgtgcgcgtggaactgttcgacgacgaggtc
gattcgctccagtacttcgaccccctgaccgggcgcgtgcgtcagaagattccgcgtttc
acggtctacccgtcgagccactacgtcacgccgcgcgagaccgtgctgcgcgcgatcgag
gacatcaaggtggagttgcgcgagcggctcgatttcttctacaaggagaatcgtctcgtg
gaggcgcagcggctggagcagcgcacgcgcttcgacctggaaatgctctcggagctgggc
ttctgcaagggcatcgagaactattcgcggcacctctccggcgccaagccgggcgagccg
ccgccgacgctggtggattacctgccgccggacgcgctgatgttcctcgacgagtcccac
gtgctgattggccagctcaacggcatgtacaacggcgaccgcgcgcgcaagaccacgctg
gtggaatacggtttccggatgccgtccgcgctggacaaccggccgctgaagttcgacgaa
ttcgaacgcaagatgcgccaggtgatgttcgtctcggccacgccggcgcagttcgagaag
gaccacgcggggcaggtggtggagcaggtggtgcggccgaccggcctggtcgacccgatc
atcatggtgcgcccggccacgacccaggtggacgatctgctatccgagatcaacatccgc
gtgcaggccggcgaccgcgtgctggtgaccacgctgaccaagcggatggccgagcagctg
accgaattcctgtccgagaacggcgtcaaggtgcgttatctgcactcggacatcgacacc
gtggaacgcgtggagatcatccgcgacctgcgcctcggcaccttcgatgtgctggtgggg
atcaacctgctgcgcgagggcctcgatattcccgaggtgtcgctggtggccatcctcgat
gcggacaaggagggcttcctgcgcgccgagcgctcgctgatccagaccatcggccgcgcc
gcccggaacgtcaatggcaccgccatcctctatgcggaccgcatgacggactcgatgaaa
cgcgcgatcgacgagaccgaacggcgccgcatcaagcagattgcccataacgaggcccat
ggcatcacgccgcgcggcgtggtcaagcggatcaaggacatcatcgacggggtgtacgac
ccgaacgaggtccgcgcggagctgagcgccgccgccgagcgcgcgaaatacgaggacatg
agcgagaagcaggtcgcgaaggagatcaagcggctggagaagcagatgctcgaccatgcg
aagaatctcgaattcgagaaggccgcccaggtgcgcgaccagttggccaagctgcgggcc
caggtgttcggggcgggcggcgatcacatcctatag

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