Cupriavidus campinensis: M5D45_10085
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Entry
M5D45_10085 CDS
T08350
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ccam
Cupriavidus campinensis
Brite
KEGG Orthology (KO) [BR:
ccam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccam03021
]
M5D45_10085 (rpoS)
Transcription machinery [BR:
ccam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M5D45_10085 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_Crp_2
HTH_20
KORA
Motif
Other DBs
NCBI-ProteinID:
URF02913
LinkDB
All DBs
Position
1:complement(2148737..2149912)
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AA seq
391 aa
AA seq
DB search
MPRQKTVSSGVVSRTRRPKQPEGKAGVAKSADVVDAEVFGDDPAAEMVPATDEPITPVAR
AGLRDTDLATDLRVDIAAADEGDDEEAEDEEEEEEAAEAAPEHDDFKTVLHTELAADTVQ
HYLNRISIKPLLSAPEELHFSTLAKGGDFSARQVMIERNLRLVVSIAKGYLNRGVPLLDL
IEEGNLGLMHAIEKFDPTRGFRFSTYATWWIRQSIERAIMNQARTVRLPVHVIRELNQVL
RAKRHLEKGGTDGRDASLEDIAHLLGKTPDEVQDVLALNEHTTSLDTPFDLDPGSSLLDF
LSDEHNAAPDQEVAHRELENLMKLWLARLSEKHRYVVERRFGLNHIEPATLEELAEEMGL
TRERVRQIQQEALVKLKRHFASQGVRKDAVL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgccacgccagaaaactgtctcatccggagttgtcagcaggacccgtcgtcccaagcag
ccggaaggaaaggctggtgtggcgaaatctgccgacgtggtggacgccgaggtctttggc
gacgatcctgccgccgaaatggtcccggccaccgacgagccgatcacgcccgttgcgcgt
gccggcctgcgtgacaccgatctcgccaccgatctgcgcgtagatatcgccgccgccgac
gagggcgacgacgaggaagccgaggacgaggaagaggaagaagaagccgccgaggccgcg
cccgagcacgacgacttcaagaccgtgctccacacggaactcgcggctgacaccgtccag
cactacctgaaccgcatcagcatcaagccgctgctgtccgcgccggaggaactccatttc
tccacgctggccaagggcggggatttctcagcgcggcaggtaatgatcgagcgcaacctg
cgcctcgtggtgagcatcgccaagggctatctgaatcgtggcgtgccgctgctcgatctg
atcgaggaaggcaacctcggcctgatgcacgccatcgagaagtttgatccgacccgtggc
ttccgcttttccacctatgccacgtggtggatccgccagagcatcgagcgcgcgatcatg
aaccaggcccgcacggtgcggttgccggtgcacgtgattcgcgagctcaaccaggtactg
cgtgccaagcgtcatcttgaaaaaggtggcaccgatggccgcgacgccagcctcgaggac
attgcacatctcctcggaaagacgcctgacgaggtgcaggacgtgctggcactcaatgaa
cataccacctcgctcgatacgccgttcgatctcgacccgggctccagcctgctcgatttc
ctttccgacgagcacaacgccgcgcccgaccaggaagtggcccaccgcgagttggaaaac
ctgatgaaactctggctggcccgcctgtcggagaagcatcgctatgtggtggagcgccgc
ttcggcctgaaccacatcgagccggccacgcttgaagagctggccgaggaaatgggtctg
acgcgcgagcgcgtgcgccagatccagcaggaagcgctggtcaagctcaagcggcatttc
gcttcgcaaggtgtcaggaaggacgccgttttatga
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