Cupriavidus campinensis: M5D45_10170
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Entry
M5D45_10170 CDS
T08350
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ccam
Cupriavidus campinensis
Brite
KEGG Orthology (KO) [BR:
ccam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccam03400
]
M5D45_10170
Enzymes [BR:
ccam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M5D45_10170
DNA repair and recombination proteins [BR:
ccam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
M5D45_10170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
URF02928
UniProt:
A0AAE9HVZ3
LinkDB
All DBs
Position
1:complement(2167449..2171015)
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AA seq
1188 aa
AA seq
DB search
MTDVHAYLRDGHPIEEADFTRAACDPARSVVVEACAGSGKTWLLVARLVRLLLAGAAPHE
ILAITFTRKAAEEMRERLLEVLSQLASGTDAEVLGALTMRGLTPDAARAALPRARGLHAK
VLASPGRMAIDTFHGWFGTLLRGAPLASGIVPGASLREDALRMKREAWAPFWRALAQPQY
AELRASYEQLVDAIGDFQARSLLDRMFHARSEWFAMREAGDPAAMLAEQLGDDATTDVLV
EALGEDEWLDDCAALAKLLGQGGKTEHGHAARMIDGLTAVRTWREAGRAPGDAAAQAFHS
LRAAFFTAAGEPRAMRRTTALVKAAGGESAVDDLLARHAEHCARLEEIAARRCEAAVLAI
NLALYRLGDALLERYQRYKNDQRAMDFADLEWLAARLMADEETATYLQVRLDARYKHLLL
DEFQDTNPLQWRILQGWLAGYQGLGEKPTVFLVGDPKQSIYRFRRADARLFGAASAMLQA
DFGATVLRTNRTRRNRPEVLDWVNAVFDHARAEGRYPLYETQTTALREPGGPVWLLPLVE
EPADEGLEAEPPSDAPTHRDTLTQPRTRQGDSLRYEEGRRVAAWLHHVRDHVPVREGDTT
RPASWRDMHLLVRRKTHLADYERALREAGIPCLSPRRGGLLATLEALDISALLAFLMTPE
SDLDLAHVLKSPLVGATDDDLLLLAGLEGEGGWWARIHAAGVPPECTDALRGGVARLRAW
LALAPQRPVHDLIDHIYDAGEVRRRYAEAAPAAIREQVLANLDAFLKLSLDLDGGRYPSL
PKFIDELQEIRRGDEDESPDEGGMGEGVEDGEAEPEDGGESQLDAVHILTVHAAKGLEAP
FVVLLDANHSDPAADRGGILVDWPPESPVPRHFSAYGKRSERGRARQPLFEAEAALAERE
NWNLLYVAMTRAQQGLLVSGVKGRASKAEKEGAAAEIAGSWYVRLAAAGVGEAVDGYPET
EAAPGDAALTPVSERVRYADFRLRYRDAAPVPQMDAFDEFDDEDQGEAVVFDAAAAAHGE
LVHALLERVARYPEAFGALPDVPTVMRWFPLAGAGAPQARERWQAQAEAAVADVRTMLTA
PALRPLFFPEAALSSRNEVELYDARGRLLRIDRLVEFADRVVVIDYKLRLLPQEHAAYGA
QLARYVAGVGPMFPGKRIEAGVATAAGEWIDAGSLRAPVPAMQQGSLF
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtccacgcctaccttcgcgatggccaccccatcgaagaggccgatttcacg
cgcgccgcctgcgaccccgcccgctcggtggtggtggaggcgtgcgccggcagcggcaag
acgtggctgctggtagcgcggctggtgcgcttgctgctggccggtgccgccccgcacgag
attctggccatcaccttcacgcgcaaggccgccgaggagatgcgcgagcgcctgctggag
gtgctgtcgcaactggccagcggtaccgatgccgaggtgctgggcgcgctgaccatgcgc
ggcctgaccccggacgccgcccgggccgcgctgccgcgtgcgcgcgggctgcacgcgaag
gtgctcgcctcgcccgggcgcatggccatcgacaccttccacggctggttcggcacgctg
ctgcgcggtgcgcccctggcctccggcatcgtgccgggcgcgtcgctgcgggaagacgcc
ctgcgcatgaagcgtgaagcctgggcgccgttctggcgcgcgctggcccagccccaatac
gccgaactgcgcgcatcgtacgaacaactggtcgatgccatcggcgacttccaggcgcgc
agcctgctggaccgtatgttccacgcgcgcagcgaatggtttgcgatgcgcgaggccggc
gacccggcggcgatgctcgcggaacaactcggcgacgatgccaccacggacgtgctggta
gaggcgctcggcgaggacgaatggctcgacgactgcgcggccctcgcgaaactgctaggg
cagggcggcaagaccgagcacggccatgccgcccggatgatcgacggcctgaccgccgtc
cgcacctggcgcgaggcgggccgcgcgcccggcgacgccgccgcgcaagccttccacagc
ctgcgcgcggcgttcttcacggcggcgggggagccgcgggcgatgcgtcgcacgacggcg
ctggtcaaggccgcgggcggcgagtccgccgtggacgatctgctagcccgccatgccgaa
cactgcgcccggctcgaagagattgccgcgcgccgctgcgaggccgccgtgctggccatc
aaccttgcgctgtaccggcttggcgatgccttgctcgagcgctaccagcgctacaagaac
gaccagcgcgcgatggatttcgcggatctcgaatggctggcggccaggctgatggccgac
gaggagaccgccacctatctccaggtgcggctggacgcgcgctacaagcacctgctgctc
gacgagttccaggacaccaatccgctccagtggcggatcctgcaaggctggctggccggc
taccagggccttggcgagaagccgaccgtgttcctggtgggcgatcccaagcagtcgatc
taccgtttccgtcgcgccgacgcccgcctgttcggcgcggcgagcgccatgctgcaggcc
gatttcggcgccaccgtgctgcggaccaatcgcacgcggcgcaaccgtcccgaggtgctg
gactgggtcaacgccgtgttcgaccatgcgcgcgccgagggtcgttatccgctgtatgaa
acccagaccacggccctgcgcgagcccggcgggccggtctggctgctgccgctggtcgag
gaaccggccgatgaagggctggaagccgagccgccgtccgacgccccgacccaccgcgac
acgctgacccagccgcgcacacggcagggcgattccctgcgctacgaggaaggccggcgc
gtggccgcctggctgcaccatgtgcgcgaccacgtgcccgtccgggaaggcgataccacg
cggcctgccagctggcgggacatgcacctgctggtgcgccgcaagacccatctggccgac
tacgaacgcgcgctgcgcgaggccggcattccgtgcctgagcccgcgccggggcggcctg
ctggccacgctggaggcgctcgacatctccgcgctgctcgccttcctgatgacgccggag
tccgacctcgacctcgcgcacgtgctcaagagcccgctggtgggcgccaccgacgacgac
ctgctgctgctggccggcctggaaggcgagggcggctggtgggcgcgcatccacgcggcg
ggcgtaccgcctgaatgtaccgacgcgctgcgcggcggtgtggctcggctgcgcgcctgg
ctcgcgctggcgccgcagcggcccgtgcatgacctgatcgaccatatctatgatgcgggc
gaggtgcgccggcgctacgccgaggccgcgccggccgccatccgcgagcaggtgctggcc
aatctcgacgccttcctgaagctgtcgctggacctcgatggcggccgttatccgagcttg
ccgaagttcatcgacgaattgcaggagattcggcgcggcgacgaggatgagagccccgac
gagggcggcatgggtgaaggcgtggaggacggcgaggcggagccggaagatggcggcgaa
agccagcttgatgccgtgcatatcctgaccgttcacgccgcgaagggcctggaggcgccg
ttcgtggtgctgctcgacgcgaaccacagtgacccggcggcggatcgtggcggcattctg
gtggactggccgccggagtcgccggtgccccggcatttctcggcctacggcaagcgcagc
gagcgcggtcgggcccgccagcccctgttcgaagccgaggcggcgctggccgagcgcgaa
aactggaatctgctctatgtggcgatgacgcgcgcccagcagggtttgctggtcagcggc
gtgaagggccgtgcgagcaaggccgagaaagagggcgcggcggccgagatcgctggtagc
tggtacgtaaggctggcggcggcgggcgtgggcgaggcggtggatggctacccggagacc
gaggccgcgccgggcgacgccgccctgacgccggtgagcgagcgcgtgcgttacgcggac
ttccgcctgcgctatcgcgacgcagcgccagtcccgcaaatggacgcgtttgacgagttc
gacgatgaagaccagggagaagcggtggtgttcgacgccgccgcagcggcccacggtgaa
ctggttcacgccttgctggaacgggtggcgcgctatccggaagccttcggcgccttgccg
gacgtgcccacggtcatgcgctggtttccgctggccggcgccggggcgccgcaggcgcgc
gaacgctggcaggcccaggccgaagcggccgtggccgatgtgcgcacgatgctgaccgcg
ccggcgctgcgcccgctgttcttccccgaagcggcgctatcgtcgcgcaacgaggtggaa
ctgtacgacgcgcgcggacggctgctgcggatcgaccgcctcgtggaattcgccgaccgc
gtggtcgtgatcgactacaagctgcgcttgctaccgcaggaacatgccgcctatggcgcc
caactcgcgcgctatgtggcgggcgtggggccgatgttccccggcaagcggatcgaggct
ggcgtggcaacggcggccggggaatggatcgacgcgggcagcctgcgggcgccggtgccg
gcgatgcagcagggatcgttgttctga
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