Cupriavidus campinensis: M5D45_12150
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Entry
M5D45_12150 CDS
T08350
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccam
Cupriavidus campinensis
Pathway
ccam03030
DNA replication
ccam03410
Base excision repair
ccam03420
Nucleotide excision repair
ccam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M5D45_12150 (polA)
03410 Base excision repair
M5D45_12150 (polA)
03420 Nucleotide excision repair
M5D45_12150 (polA)
03440 Homologous recombination
M5D45_12150 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccam03032
]
M5D45_12150 (polA)
03400 DNA repair and recombination proteins [BR:
ccam03400
]
M5D45_12150 (polA)
Enzymes [BR:
ccam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M5D45_12150 (polA)
DNA replication proteins [BR:
ccam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M5D45_12150 (polA)
DNA repair and recombination proteins [BR:
ccam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
M5D45_12150 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M5D45_12150 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
URF03283
UniProt:
A0AAE9L0W8
LinkDB
All DBs
Position
1:complement(2568968..2571790)
Genome browser
AA seq
940 aa
AA seq
DB search
MSDSQKTLLLVDGSSYLYRAYHALPDLRNGEGLPTGAIYGMINMLRKLRNDFPAEYIACV
FDAKGKTFRDALYPAYKEHRPSMPEDLAKQIEPIHEAVRALGWPIVVVEGVEADDVIGTL
ACQATAQGVRTVVSTGDKDLAQLVNDHVTLVNTMSGEVLDPPGVVAKFGVPPERIVDYLS
LIGDAVDNVPGVPKVGPKTAVKWLAEYGTLDSIMAGADGIKGVVGENLRNTLDWLPRARE
LVTVKTDCDLSDAVADFHALRELGEDNEKLVAFFSRYGFKTWLREATGESLPNARAAARS
SRAGAAPAPSPQGGLFDGPADASADLPAPDTTPAEIRYETVTTEAALDAWIARIIDAPLT
AIDTETTSLDPMQAQLVGLSLSVEPGEAAYIPVAHRGPDVAGMENHGQLSREYVLERLRP
WLEDPARPKLGQHLKYDSHVFANHGVKLLGIAQDTMLESYVLASHRNHGMDSLAERLLNL
KTLTYEEVCGKGASQIGFDQIDLQRATEYAAEDADVTLRLHRKMHPQLEAASGLKYVYEN
IEIPVSVVLQKIERNGVLIDAARLGAQSAELGQRMMALEAAAFEAAGQPFNLGSPKQIGE
ILFTQMKLPVVKKTASGAPSTDEEVLQKLAEDYPLPKLLLDYRGLSKLKSTYTDKLPKMV
NPQTGRVHTSYGQATAVTGRLASTEPNLQNIPVRTEEGRRIREAFIAAPGNVIVSADYSQ
IELRIMAHISGDENLLRAFANGEDIHRATAGEIFGVEREAVSSEQRRYAKVINFGLIYGM
SAFGLASNLGIEREAAKHYIDRYFMRYPGVAHYMEETRQTAREQGYVETVFGRRLWLPDI
NGGNGPRRQGAERAAINAPMQGTAADLIKLSMIAVQDWLEGDNLGTRQIMQVHDELVLEV
PQAELELVKTRLPELMCSVATLRVPLVAEVGSGSNWEEAH
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagtcaaaaaacgcttttgctcgtcgatggatcgagctacttgtatcgcgcg
tatcacgctctgccggacctgaggaatggcgaagggctgcctacaggggcaatctacggc
atgatcaacatgttgcgcaagctgcgcaacgacttcccggcagagtatatcgcttgcgtg
ttcgacgccaagggcaagacgttccgggatgcgctataccccgcatacaaggaacatcgc
ccgtccatgcccgaggatctggccaaacagatcgagccgatccacgaggccgtgcgcgcg
ctgggctggccgatcgtggtggtggaaggcgtggaagccgatgacgtgatcggcacgctg
gcctgccaggccacggcgcagggtgtgcgtaccgtggtatccacgggcgacaaggacctc
gcgcagctggtgaacgaccacgtcacgctggtcaacacgatgagcggcgaagtgctcgat
ccgcccggtgtggtggccaagttcggcgtgccgccggagcggatcgtcgattatctctcc
ctgattggcgatgcggtggacaacgtgcccggcgtgcccaaggtggggccgaagaccgcc
gtgaagtggctggccgagtacggcacgctggacagcatcatggccggcgccgacggcatc
aagggcgtggtgggcgagaacctgcgcaacacgctcgactggctgccgcgcgcgcgggag
ctggttacggtcaagaccgactgcgacctcagcgacgccgtggcggacttccacgcgctg
cgcgagctgggcgaggacaacgagaagctggtcgccttcttctcgcgctatggcttcaag
acctggctgcgcgaggccacgggcgagtccctgccgaacgcccgcgccgccgcccgctcg
tcgcgtgccggtgcggcgccggcaccttcgccgcagggcgggctgttcgatggcccggcc
gatgcctcggccgacctccccgcgcccgacaccacccccgccgagatccgctacgagacc
gtgaccaccgaggccgcgctcgacgcctggatcgcccggatcatcgatgcgccgctgact
gccatcgacaccgaaaccacctcgctcgacccgatgcaggcccagctggtgggcctgtcg
ctgtcggtggagccgggtgaggccgcctacatccccgtcgcccatcgcggcccggatgtg
gccggcatggagaaccacggccagctgtcgcgcgaatacgtgctggagcggctgcgcccg
tggctcgaagacccggcgcggccgaagctcggccagcacctgaagtacgactcccatgtc
ttcgccaaccacggcgtcaagctgctcggcatcgcccaggacacgatgctggaaagctac
gtgctggcctcgcaccgtaaccacggcatggacagcctggccgagcgcctgctgaacctg
aagacgctgacctacgaggaagtctgcggcaagggcgcgagccagatcggcttcgaccag
atcgacctccagcgcgccacagagtacgcggccgaggatgctgacgtgacgctgcgtctc
catcgcaagatgcatccgcagctggaagcggccagcgggctcaagtatgtgtacgagaac
atcgagattccggtctcggtggtgctccagaagatcgagcgcaatggcgtgctgatcgac
gccgcgcggcttggcgcacagagcgccgaactcggccagcgcatgatggcgctggaggcc
gccgccttcgaggccgccgggcagccgttcaacctcggttcgccgaagcagatcggcgag
atcctgttcacgcagatgaagctgccggtggtcaagaagaccgccagcggggcgccatcc
acggacgaagaggtgctgcagaagctggccgaggactatccgctgcccaagctgctgctc
gactatcggggtttgtccaagctgaagtccacctacacggacaagctgccgaagatggtc
aatccgcagaccgggcgcgtgcacacgagctacgggcaggccacggccgtgacaggccgg
ctggcctcgaccgagccgaacctccagaacatcccggtgcggaccgaggaggggcggcgc
atccgcgaggcgttcatcgccgcgccgggcaacgtgatcgtctccgccgactactcgcag
atcgagctgcgcatcatggcccatatctcgggcgacgagaacctgctgcgcgccttcgcc
aacggcgaggacatccaccgcgccaccgcgggcgagatcttcggcgtggagcgcgaggcg
gtgtccagcgagcagcgccgctacgccaaggtcatcaacttcggcctgatctatggcatg
agcgcgttcgggctggccagcaacctcggcatcgagcgcgaggcggccaagcactacatc
gaccgctacttcatgcgctaccccggcgtggcccactacatggaagagacgcgccagacc
gcgcgcgagcagggctacgtggaaacggtgttcggccgccgcctctggctgcccgacatc
aacggcggcaatggcccgcgccgccagggcgccgagcgcgccgccatcaacgcgccgatg
cagggcacggcggcggatctcatcaagctgtcgatgatcgccgtgcaggactggctcgag
ggtgacaacctcggtacgcgccagatcatgcaggtgcacgatgaactggtgctcgaagtg
ccgcaggccgaactcgaactggtgaagacgcgcctgcccgagctgatgtgctccgtggcg
acgctgcgcgtgccgctggtggccgaagtgggcagcggcagcaactgggaagaggcgcat
tga
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