Cupriavidus campinensis: M5D45_14375
Help
Entry
M5D45_14375 CDS
T08350
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ccam
Cupriavidus campinensis
Brite
KEGG Orthology (KO) [BR:
ccam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccam03016
]
M5D45_14375
Enzymes [BR:
ccam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
M5D45_14375
Transfer RNA biogenesis [BR:
ccam03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
M5D45_14375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
SH3_YKFC_2nd
Motif
Other DBs
NCBI-ProteinID:
URF03685
UniProt:
A0AAE9I178
LinkDB
All DBs
Position
1:complement(3040330..3042456)
Genome browser
AA seq
708 aa
AA seq
DB search
MQLLFEEGGEIRAGTVLAQQGEAYQVELPAGKRTKVKARDVLLQFAQPSAIEMVRQTGDL
TADIDLDFLWECAPAEEFGFAELAAEYYGADAGPVQQAALAMALHGNPVYFRRKGRGRYL
RAPEDQLQAALAAVERKKQQALVQAGYEDQLKALTLPDAFRGKVLQLLFKPDKNSLEFKA
MDAACTALGMTPMRLMVAVGGVSSPRALHEAKFLSECFPKGTGFPDVDVPEPGGDLPLAD
VQAFSIDDVTTTEIDDALSVTELDGGKLRVGIHIAAPALGIKRGDALDAIARQRLSTVYF
PGDKITMLPDPIVERYTLQEGRTCPALSLYVTVDPNTPDGIAITASETRAERVPIAANLR
HNLLEDVVTEAALANGTGDYPFRAALTHLFHLANHLHDERQRARLASGLRPESHNRADYN
FYIDQLEGGAERVRIEQRRRGSPLDKIVAELMILANSTWGKLLADHGVPGIYRTQKAWGM
HRTRMQTYPAPHEGLGVAQYAWSTSPLRRYVDLVNQWQILAVAQHGVTAKLVAPFKPKDA
DLLAAVADFEGTYAAYAEHQSTMERYWCLRWLAQEGREKLMATVLKEGAVRFTEIPLVTR
VPELAQAARGTQVLLEIASTDEISLEVSCRVLEVFAGEGEVPEEELETDEEAAEVSAEAA
AEAAAEDAAEAAAEGGTAGQETPAGEDAEPASDDEASAPRDTGAGPAA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgctgtttgaagaaggcggcgaaattcgcgccggcaccgtgctcgcccagcag
ggtgaggcctaccaggtggaattgccggcaggcaagcgcaccaaggtgaaggcgcgcgac
gtgctgctgcagtttgcccagccgtcggcaatcgaaatggtgcggcagaccggcgacctg
accgccgacatcgacctcgacttcctctgggaatgcgcgccggccgaggaattcggcttt
gccgagctggccgccgaatactacggcgcagatgccggcccggtgcagcaggccgcgctg
gccatggcgctgcatggcaatccggtctacttccgccgcaagggccgtggccgctacctg
cgcgcgccggaagaccagctgcaggccgcgctggccgccgtcgaacgcaagaagcagcag
gcgctggtgcaggccggctatgaagaccagctcaaggcgctgacgctgccggacgcgttc
cggggcaaggtgctgcaactgctgttcaagccggacaagaacagcctcgaattcaaggcg
atggatgccgcctgcacggcgctcggcatgacgccgatgcggctgatggtggccgtgggc
ggcgtgtccagcccgcgcgcgctgcacgaggccaagttcctctccgaatgcttcccgaag
ggcaccggcttcccggacgtggacgtgcccgagccgggcggcgacctgccgctggccgac
gtgcaggcgttctcgatcgacgatgtgacgaccaccgagatcgacgatgcgctgtccgtc
accgaactcgatggcggcaagctgcgcgtgggcatccacatcgccgcgccggcgctgggc
atcaagcgtggcgatgcgctcgacgccatcgcgcgccagcgcctgtccacggtgtacttc
ccgggcgacaagatcaccatgctgccggaccccatcgtggagcgctacacgctccaggaa
gggcgcacctgcccggcgctgtcgctgtatgtgacggtggacccgaacacgccggacggc
atcgccatcaccgccagcgagacccgcgccgagcgcgtgccgattgccgccaacctgcgc
cacaacctgctcgaggacgtggtgaccgaggccgcgctggccaacggcaccggcgactac
ccgttccgggccgcgctgacgcacctgttccacctggccaaccatctgcacgacgagcgc
cagcgcgcgcgccttgccagcgggctgcggccggagtcgcacaaccgggccgactacaac
ttctatatcgatcaactcgaaggcggcgccgagcgcgtgcgcatcgagcagcgccgccgg
ggctccccgctggacaagatcgtggccgagttgatgatcctggccaacagcacgtggggc
aagctgctggccgaccacggcgtgccgggcatctatcgcacccagaaggcgtggggcatg
caccgcacgcggatgcagacctacccggcgccgcacgaggggctgggcgtggcgcagtac
gcgtggagcacctcgccgctgcgccgctacgtcgatctggtgaaccagtggcagatcctg
gcggtggcgcagcatggcgtcacggccaagctggtggcgccgttcaagcccaaggatgcc
gacctgctggctgccgtggcggacttcgaaggcacctatgcggcgtatgccgagcaccag
tccaccatggaacgctactggtgcctgcgctggctggcccaggaaggccgcgagaagctg
atggcgacggtgctcaaggaaggcgcggtgcgctttaccgagattccgctggtgacgcgc
gtgccggaactggcgcaggcggcccggggcacccaggtgctgctcgagattgcctcgacg
gacgagatttcgctggaagtgtcgtgccgcgtgcttgaggtctttgccggcgagggcgag
gttcccgaggaggaactggaaaccgacgaggaagcggcggaagtgtcggccgaggcagcc
gcagaggcggcggccgaagatgcggcggaagcggctgccgaggggggtacggcaggccag
gaaaccccggccggggaggatgccgagcccgcttcggacgacgaggcgtcggcgccacgc
gacaccggggctggcccggcggcctga
DBGET
integrated database retrieval system
