Cupriavidus campinensis: M5D45_14970
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Entry
M5D45_14970 CDS
T08350
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ccam
Cupriavidus campinensis
Pathway
ccam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M5D45_14970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccam03400
]
M5D45_14970
Enzymes [BR:
ccam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
M5D45_14970
DNA repair and recombination proteins [BR:
ccam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M5D45_14970
Prokaryotic type
M5D45_14970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
URF03785
LinkDB
All DBs
Position
1:3169658..3170428
Genome browser
AA seq
256 aa
AA seq
DB search
MQADFFAAPAAEPPAIAPLQTQVDALPAAWRALLAPCLGHAAWDELARFVDGERAAGKPV
FPHAVFHALHLTPPDAVKVVILGQDPYHGTGVVGGAEIPQAHGLAFSVPEGVKVPPSLRN
IFKEIGAEYGAEPTRASGNLEGWARQGVLLLNTVLTVEQGQAASHAKRGWEAVTDCLIHA
LAASQPNLVFLLWGSHAQAKRALLDGQTAHTHCVLEAPHPSPLSAHRGFLGCGHFRQAND
WLERHGRAPIDWLKAD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccgacttctttgccgccccggccgccgagccccctgccatcgccccgctgcaa
acccaggtcgatgcgctgcccgccgcgtggcgggccctgctcgcgccgtgcctcggccat
gccgcgtgggacgaactggcgcgctttgtcgatggcgagcgcgccgccggcaagccggta
tttccgcacgcggtcttccatgcgctgcacctgacgccgcccgatgccgtcaaggtcgtg
atcctggggcaagacccgtatcacggcaccggggtggtcggcggcgcggagattccgcag
gcgcacggcctggcgttctcggtgcccgagggcgtcaaggtgccgccgagccttcgcaat
atcttcaaggaaatcggggccgagtatggcgccgagccgacgcgcgcctccggcaacctg
gaaggctgggcgcgtcagggcgtgctgctgctgaacaccgtgctgaccgtagagcaaggc
caggcggccagccacgccaagcgcggctgggaggcggtgaccgactgcctgatccacgcg
ctggcggcgtcacagcccaatctcgtgttcctgctatggggcagccatgcgcaagccaag
cgggcgctgctcgatgggcagaccgcgcacacgcattgcgtcctggaggcgccacacccg
tcgccgctgtccgcgcatcgcggattcctgggttgcgggcatttccggcaggccaatgac
tggctggaacgccatggccgtgcgccgatcgactggctgaaagccgactga
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