Cupriavidus campinensis: M5D45_15750
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Entry
M5D45_15750 CDS
T08350
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ccam
Cupriavidus campinensis
Pathway
ccam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M5D45_15750 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccam03019
]
M5D45_15750 (recQ)
03400 DNA repair and recombination proteins [BR:
ccam03400
]
M5D45_15750 (recQ)
Enzymes [BR:
ccam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M5D45_15750 (recQ)
Messenger RNA biogenesis [BR:
ccam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M5D45_15750 (recQ)
DNA repair and recombination proteins [BR:
ccam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M5D45_15750 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
URF03926
UniProt:
A0AAE9L1R8
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All DBs
Position
1:complement(3314624..3316477)
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AA seq
617 aa
AA seq
DB search
MSRALAILKEVFGYHAFRGRQAEIIDHVAEGGDCLVLMPTGGGKSLCYQIPALLRQQAGQ
GVGIVVSPLIALMQDQVAALTEAGVRAAVLNSTLTSSEASAVERDLLAGRLEILYVAPER
LMTPRFLDLLERTRVGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPQVPRIALTATAD
TLTRDEIVERLALDDARVFISSFDRPNIRYRIVEKDNARNQLLAFIKAEHMNGDGGHDSG
IVYCLSRKKVEDTAAWLAGHGIQALGYHAGMDAQVRQHHQARFREEEGIVMVATIAFGMG
IDKPDVRFVAHLDLPKSMEGYYQETGRAGRDGLPANAWMAYGLGDVVQQKRMIDESEADD
AHKRVSSSKLDALLGLCETAGCRRVRILAYFDENAEPCGNCDTCLEPPATWDGTREAQMA
LSCVYRTAQASRVHFGATHLIDILRGNANEKIRQWGHDKVSTFGIGKDRSVSEWHAIFRQ
LIAHGLLVIDHGGHGALLLGESARAVLKGEQPITLRRQVNKPAKSGDRAARGTRTDHSAT
MDPDALAHWEALRRWRTAAAREHGVPAYVIFHDATLAELARSAPESLDELAEVPGIGASK
LERYGEEILETLRAVRV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcgcactggcgatcctcaaagaagtcttcggctaccacgcctttcgcggccgg
caggcagagatcatcgaccatgtggccgagggcggcgattgcctggtgctcatgcccacg
ggcggcgggaagtcgctctgctaccagattccggcgctgctgcgccagcaggcggggcag
ggtgtcggtatcgtcgtctcgccgctgatcgcgctgatgcaggaccaggtggctgcgctg
accgaggccggtgtgcgcgcagcggtgctcaactccacactgaccagcagcgaggcctcc
gccgtggagcgcgatctgctcgcggggcggctggaaatcctctatgtggcgcccgaacgg
ctgatgacgccgcgcttcctcgacctgctcgaacgcacccgcgtcgggctgttcgcgatc
gacgaggcgcattgtgtgtcgcaatggggccacgacttccggcccgagtacattcagctg
tcggtgctgcacgagcggttcccgcaggtgccgcgtattgcactcaccgccacggccgat
acgctcacgcgcgatgaaatcgtcgagcggctggcgctggacgacgcgcgcgtgttcatc
tccagcttcgaccggccgaacatccgctatcgcatcgtcgagaaggacaacgcgcgcaac
cagctgctcgccttcatcaaggccgagcacatgaacggcgacggcgggcacgacagcggc
atcgtgtattgcctgtcgcgcaagaaggtcgaggacaccgccgcctggctggccggccac
ggcatccaggcgctggggtatcacgccggcatggatgcccaggtgcggcagcatcaccag
gcgcgcttccgcgaggaagagggcatcgtgatggtggcgacgattgccttcggcatgggt
atcgacaagccggacgtccggttcgtcgcccacctggacctgcccaagagcatggaaggc
tattaccaggaaaccggccgcgccggccgcgatggcctgcccgccaacgcgtggatggcc
tacggcctgggcgacgtggtgcagcagaagcggatgatcgacgagtccgaggcggacgac
gcccacaagcgcgtgtcgtcctccaagctcgacgccctgctgggtttgtgcgagacggcg
ggttgccggcgcgtgcgcatactggcgtacttcgacgaaaatgccgagccgtgtggcaat
tgcgacacttgtcttgagccgccggcgacctgggacggcacgcgcgaggcccagatggcc
ctgtcctgcgtctatcgcacggcccaggcaagccgcgtccacttcggcgcgactcatctg
atcgacatcctgcgcggcaacgccaacgagaagatccggcagtggggccatgacaaggtc
tcgaccttcggcatcggcaaggaccgatcggtgtcggagtggcatgcgatcttccgccag
ctgatcgcccacgggctgctggtgatcgaccacggtggccatggcgcgctgctgctgggc
gaatccgcccgggcggtgctcaagggcgagcagcccattacgctgcgccggcaggtcaac
aagccagccaagtccggcgaccgtgccgcgcgtggcacgcgtaccgaccacagtgccacg
atggatcccgacgcgctcgcgcattgggaagcgctgcgccgctggcgcacggccgcggcg
cgcgagcacggcgtgccggcctacgtcattttccacgacgcaaccctggccgaactggcg
cgcagcgcgcccgaatcgctcgacgaactggccgaagtgcccggtatcggtgcatcgaag
ctcgaacgctacggcgaggaaatcctcgagacactgcgcgcggtccgagtctga
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