| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
ccam Cupriavidus campinensis
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ccam00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M5D45_15875 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ccam03021]
M5D45_15875 (rpoC)
03400 DNA repair and recombination proteins [BR:ccam03400]
M5D45_15875 (rpoC)
Enzymes [BR:ccam01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M5D45_15875 (rpoC)
Transcription machinery [BR:ccam03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M5D45_15875 (rpoC)
DNA repair and recombination proteins [BR:ccam03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M5D45_15875 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:complement(3340002..3344243)
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| AA seq |
1413 aa
MKALLDLFKQVQQEEQFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELAAPTAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAFVVLEPGMTPLKKSQIMSEDDYIAKCDEYGEGEFVAM
MGAEGIRELLRGIDIEKQIEQIRAELQATGSEAKIKKFAKRLKVLEAFQRSGIKPEWMIL
EVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRML
QEAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGP
TLKLHQCGLPKLMALELFKPFIFHKLETMGIATTIKAAKKEVESQTPVVWDILEEVIREH
PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQME
ARTLMLASNNVLFPANGDPSIVPSQDVVLGLYYTTRDKINGKGEGMTFADISEVIRAYEN
KEVELASRVNVRITEYVLVDKDAVGDARFAPKITLQATTVGRAILSEILPKGLPFSVLNK
PLKKKEISRLINTAFRKCGLRETVIFADKLLQSGFRLATRAGISIAIDDMLVPPQKEKII
SDAAAKVKEYDKQYMSGLVTDQERYNNVVDIWGAAGDQVGKAMMEQLQHEDVVDREGNTV
KQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFI
STHGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTTNGVAMKALVEGGEVIEA
LRDRILGRVTVADVVNPETQETAIETGTLLDEDLVDLIDNLGVDEVKVRTPLSCDTRYGL
CGKCYGRDLGRGVLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKA
TGTVRFTATMRYVTNAKGELIVISRSGETLITDDHGRERERHKIPYGATLLVQDGQAIKA
GTQLATWDALTRPIVSEYTGMTKFENVEEGVTVAKQMDEVTGLSTLVVIDAKRRTAATKG
LRPQVKLLDANGQEVKIPGTDHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRD
ITGGLPRVAELFEARSPKDAAVLAEVTGTTSFGKDTKGKQRLVITDLDGNAHEFLIAKEK
QVLVHDGQVVNKGEMIVEGPADPHDILRLKGIEELAHYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQIQDVGDTRFIPGEQVERSELLDENDRMIADGKRPATHENLLLGITKASL
STDSFISAASFQETTRVLTEAAIMGKTDDLRGLKENVIVGRLIPAGTGLAYHRARKAREA
AERERAQAISDEEQSLFIEPPVVQATEGDSDAV |
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| NT seq |
4242 nt +upstreamnt +downstreamnt
atgaaagcattgctcgatctctttaagcaggttcagcaggaagagcagttcgacgcgatc
aagatcggcctcgcctcgcccgagaagatccgttcgtggtcgtacggtgaagtgaagaag
ccggaaacgatcaactaccggacgttcaagccggaacgcgatggcctgttctgcgccaag
atctttggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcat
cgtggcgtgatctgcgagaagtgcggcgtggaagtcacgctggccaaggtgcgccgcgag
cgcatgggccacatcgaactggctgcgccgaccgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtcctggacatgaccctgcgcgacatcgaacgcgtgctgtac
ttcgaggcattcgtggtgctggaaccgggcatgaccccgctcaagaagagccagatcatg
tccgaggacgactacatcgcgaagtgcgacgagtacggcgagggtgaattcgtcgccatg
atgggcgccgagggcatccgtgaactgctgcgcggcatcgacatcgagaagcagatcgaa
cagatccgcgccgagctgcaggccaccggttccgaagccaagatcaagaagttcgccaag
cgcctgaaggtgctcgaggcgttccagcgttcgggcatcaagcccgagtggatgatcctg
gaagtgctgccggtgctgccgccggaactgcgtccgctggtaccgctggatggcggccgt
ttcgccacctcggacctgaacgacctgtatcgtcgcgtcatcaaccgtaacaaccgcctg
aagcgcctgctggagctgaaggcgcccgagatcatcgtgcgcaacgaaaagcgcatgctg
caggaagcggtggattcgctgctggacaacggccgtcgcggcaaggcgatgaccggcgcc
aacaagcgtccgctgaagtccctggccgagatgatcaagggcaagggcggccgtttccgt
cagaacctgctgggcaagcgcgtggactactcgggccgttcggtcatcgtggtgggcccg
acgctgaagctgcaccagtgcggcctgcccaagctgatggcgctcgagctgttcaagccg
ttcatcttccacaagctggaaacgatgggcatcgccaccacgatcaaggcggcgaagaag
gaagtggaaagccagacgccggtggtgtgggacatcctcgaagaggtgatccgcgagcac
ccggtgatgctgaaccgtgcgccgacgctgcaccgcctgggtatccaggcgttcgagccg
gtgctgatcgaaggcaaggccatccagctgcacccgctggtctgcgcggcattcaacgcc
gacttcgacggtgaccagatggctgttcacgtgccgctgtcgctggaagcgcagatggaa
gcccgcacgctgatgctggcctccaacaacgtgctgttcccggccaacggcgatccgtcg
atcgtcccgtcgcaagacgtggtgctgggtctgtactacacgacccgcgacaagatcaac
ggcaagggtgaaggcatgacgttcgctgacatcagcgaagtcatccgcgcctacgagaac
aaggaagtcgaactcgcttcgcgcgtgaatgtgcggatcaccgagtacgtgctcgtcgac
aaggacgccgtgggcgatgcccgcttcgcgcccaagatcacgctgcaggccaccacggtc
ggccgcgcgatcctgtccgagatcctgccgaagggcctgccgttctcggtgctgaacaag
ccgctgaagaagaaggaaatctcgcgcctgatcaacaccgcgttccgcaagtgcggtctg
cgcgagaccgtgatcttcgccgacaagctgctgcagtcgggcttccgcctggccacgcgc
gccggtatctcgatcgccatcgacgacatgctggtgccgccgcagaaggagaagatcatc
tccgacgcagctgccaaggtgaaggaatacgacaagcagtacatgtcgggtctggtgacg
gaccaggagcgttacaacaacgtcgtggacatctggggcgccgccggcgaccaggtgggc
aaggcgatgatggagcagctccagcacgaagacgtggtcgaccgcgaaggcaacacggtc
aagcaggaatcgttcaactccatctacatgatggccgactcgggcgcgcggggttccgca
gcgcagatccgccagctggcgggcatgcgtggcctgatggccaagccggatggctcgatc
attgaaacgccgattacggcgaacttccgtgaaggcctgaacgttctgcagtacttcatc
tcgacccacggtgcgcgtaagggcctggccgatacggcactgaagaccgcgaactcgggt
tacctgacccgtcgtctggtcgacgtgacgcaggatctggtcgtggtggaagacgattgc
ggcaccaccaacggcgtggccatgaaggccctggtcgaaggcggtgaagtgatcgaagca
ctgcgcgaccgtatcctcggccgcgtgaccgtggctgacgtggtgaacccggaaacgcag
gaaacggcgatcgagaccggcacgctgctggacgaagacctggtcgacctgatcgacaac
ctcggcgtggacgaagtcaaggtccgcaccccgctgtcgtgcgacacgcgttacggcctg
tgcggcaagtgctacggccgcgacctgggccgcggcgtgctggtgaactccggcgaagcg
gtgggcgtgattgccgcgcagtcgatcggtgagccgggtacgcagctgaccatgcggacg
ttccacatcggtggtgcggcatcgcgtgcggcagtggcctcgagcgtggaagccaaggcg
accggtacggtccgcttcacggcgaccatgcgctacgtgacgaacgccaagggcgaactg
atcgtgatctcgcgttcgggcgagacgctgatcacggacgaccacggccgcgagcgcgag
cgccacaagatcccgtacggcgccacgctgctggtgcaggacggccaggccatcaaggct
ggcacgcagctggccacgtgggacgcgctgacgcgcccgatcgtgtcggaatacaccggc
atgacgaagttcgagaacgtcgaagagggcgtgaccgtcgccaagcagatggacgaagtc
accggcctgtcgaccctcgtggtgatcgatgccaagcgccgtacggctgccaccaagggc
ctgcgcccgcaggtgaagctgctcgacgcgaacggccaggaagtcaagattccgggcacg
gaccactccgtgaccatcggcttccaggttggcgcgctgattaccgtgaaggacggccag
caggtgcacgtgggtgaagtgctcgcacgtatcccgaccgaatcgcagaagacccgcgac
attaccggtggtctgccgcgtgtggccgagctgttcgaagcgcgttcgccgaaggacgcc
gccgtgctggcggaagtcaccggtaccacgtcgttcggcaaggacaccaagggcaagcag
cgcctggttatcacggacctggacggcaacgcccacgagttcctgatcgccaaggaaaag
caggtgctggtgcacgatggccaggtggtgaacaagggcgaaatgatcgtggaaggtccg
gcggacccgcacgacatcctgcgcctgaagggcatcgaggaactggcgcactacatcgtg
gacgaagtgcaggacgtgtaccgtctgcagggcgtgaagatcaacgacaagcacatcgaa
gtgattgttcgtcagatgctgcgccgcgtgcagatccaggacgtgggcgacacccgcttc
atcccgggtgagcaggtggagcgctcggagctgctggacgagaacgaccgcatgattgcc
gacggcaagcgtccggccacgcacgagaacctgctgctgggtatcacgaaggcgtcgctg
tccacggacagcttcatctcggcggcatcgttccaggaaacgacgcgcgtgctgaccgag
gccgcgatcatgggcaagaccgacgacctgcgtggtctgaaggaaaacgtgatcgtgggt
cgtctgatccccgccggtaccggcctggcctaccaccgtgcccgcaaggcacgcgaggcg
gccgagcgcgaacgcgcccaggcgatctcggacgaagagcaatcgctcttcatcgagccg
cccgtggtgcaggcgaccgagggcgacagcgacgcggtctga |
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