KEGG   Cupriavidus campinensis: M5D45_20970
Entry
M5D45_20970       CDS       T08350                                 
Name
(GenBank) DNA topoisomerase IB
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
ccam  Cupriavidus campinensis
Brite
KEGG Orthology (KO) [BR:ccam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccam03032]
    M5D45_20970
   03400 DNA repair and recombination proteins [BR:ccam03400]
    M5D45_20970
Enzymes [BR:ccam01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     M5D45_20970
DNA replication proteins [BR:ccam03032]
 Prokaryotic type
  DNA Topoisomerases
   M5D45_20970
DNA repair and recombination proteins [BR:ccam03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      M5D45_20970
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact Ribosomal_L40e
Other DBs
NCBI-ProteinID: URF07658
UniProt: A0AAE9I6J3
LinkDB
Position
2:717357..718445
AA seq 362 aa
MSPASVTPSPAETAEQPVDAALRAVGLRHADDGEAGITRRRAGAGFYYVDAKGKRIDDKA
TLARIQALAIPPAYESVWICADPAGHLQATGRDARGRKQYLYHPDWAALRDTDKYTRLMA
FGHALPRLRGRLARDLARNGMPREKILAAVVTLLDATLVRVGTPRYARQNRTYGLTTLHR
RHVAVRGSRLRFQFTGKSGVTHDVSVNDARLARIVRNCTELPGQRLFKYKDPDGEIREIG
SVDVNAYLQEVTGGDFTAKDFRTWAGSVHALALLRKTTADSETARKKAVTEVIREVAQRL
RNTMAVCRKCYVHPDVLTAFMDDTLQGLPAPRAGVRLRADEARLLALLESTCAPAATPRK
AA
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgagccccgcgtccgtcaccccttcgcccgcagagactgccgagcaaccggtcgacgcg
gcgctgcgcgccgtggggttgcgccatgccgatgacggcgaggcggggatcacgcggcgc
cgcgcgggcgcgggcttttactacgtcgatgccaagggcaagcggatcgatgacaaggcc
acgctcgcgcgcatccaggcgctggcgattccgccggcctacgagtcggtatggatctgc
gccgatcccgccgggcatctccaggccacgggccgcgatgcgcgcggccgcaagcaatac
ctctatcacccggactgggccgcgctgcgcgacaccgacaagtacacccgcctgatggcc
ttcgggcatgcgttgccgcgcctgcgtgggcggctggcccgtgatctggcgcgcaacggc
atgccgcgcgagaagatccttgccgccgtggtcacgttgctggatgccaccctcgtgcgc
gtaggcacgccgcgttacgcgcgccagaatcgcacctatgggctgaccacgctgcaccgg
cgccatgtggccgtgcgcggcagccgcctgcgcttccagttcaccggcaagagcggcgtg
acccacgacgtgtccgtcaacgatgcccgcctggcccgcatcgtccgcaactgcacggag
ctgcctgggcagcggctgttcaagtacaaggacccggacggcgagatccgcgagatcggc
tcggtcgatgtcaacgcttacctgcaggaggtgaccggcggcgatttcacggccaaggac
ttccgcacctgggccggcagcgtccacgcgctggcgctgctgcgcaagaccacggccgac
agcgagaccgcgcgcaagaaggccgtgaccgaggtcatccgcgaagtggcacagcggctg
cgcaacaccatggccgtctgtcgaaaatgctacgtgcacccggatgtgctcacggctttc
atggatgacaccttgcagggcttgccggcaccgcgtgccggcgtgcgcctgcgtgccgac
gaagcgcgcctgctggcgctgctggagagcacctgtgcgccggcggcgacgcctcgcaaa
gcagcatga

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