Cupriavidus campinensis: M5D45_27040
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Entry
M5D45_27040 CDS
T08350
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ccam
Cupriavidus campinensis
Pathway
ccam03030
DNA replication
ccam03430
Mismatch repair
ccam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M5D45_27040
03430 Mismatch repair
M5D45_27040
03440 Homologous recombination
M5D45_27040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccam03032
]
M5D45_27040
03400 DNA repair and recombination proteins [BR:
ccam03400
]
M5D45_27040
Enzymes [BR:
ccam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M5D45_27040
DNA replication proteins [BR:
ccam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M5D45_27040
DNA repair and recombination proteins [BR:
ccam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M5D45_27040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
RNase_H_2
DUF7508
DNA_pol_A_exo1
DUF4031
Motif
Other DBs
NCBI-ProteinID:
URF08197
UniProt:
A0AAE9I8V6
LinkDB
All DBs
Position
2:2072885..2074462
Genome browser
AA seq
525 aa
AA seq
DB search
MTYVPERLASRDAGALDAHSLATALARPIVFVDLETTGADAQRDRITEIGVVEVGPDGIQ
EWDTLLDPQASIPSFIQGMTGITEAMVRGKPTFESIAESLAERLQGRLFVAHNARFDYGF
LKNAFRRAGITFRADVLCTVRLSRALFPSVERHGLDALIARFGLTPKGRHRALADAELLW
QFWQKLHGLYSVDLVESAVKSLVKQASLPAGLSETALDEVPDRPGVYLFYGDEDAPLYVG
KSIHLRQRIKSHFSGDHRHEKEMRLARGVRRVAWHETGGEVGALLMEAQLVKSLQPLHNQ
LLRQNSELFSWEMPDGLPVPRLRSDRHVDFSRHANLYGAFGSRAAAQARLRELAEEHTLC
LTTLMLEPTHRRGNPCFARQLHRCAGACTGDESRAAHRERTMAAIATLALQPWPFAGAVA
WRELDHPQQPWHVLENWCYLGSVPDLHAAAALLAVPARFDVDTYQILAPRLDALRASAVP
LASSRPFALTPPEPPPPRRAPASSVKQPARTTERSSDTQTLTLFA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgacctacgtgcccgaacgcctcgcgagccgcgacgccggcgccctcgatgcgcactcg
ctcgccaccgccctcgcgcggccgatcgtattcgtcgacctggaaaccacgggcgccgat
gcccagcgcgaccgcattaccgagattggcgtggtcgaagtcggccccgacggcatccag
gagtgggacacgctgctagacccgcaggccagcatcccgtcgttcatccagggcatgacc
ggcattactgaagcaatggtgcgcggcaagcccacgttcgagtcgattgccgagtcgctg
gcggagcggctgcaggggcgcctcttcgtggcccacaacgcgcgcttcgactacggcttc
ctgaagaatgcgttccggcgcgccggcatcaccttccgcgccgacgtcctttgtacagtg
cggctgtcgcgcgcgctgttcccgtcggtggagcgccatgggctggacgcgctgatcgcc
cgcttcggcctgacgcccaaggggcgtcaccgcgcgctggcggacgccgaactgctctgg
cagttctggcagaagctgcatggtctgtattccgtggatctggtggaatccgccgtcaag
tcgctggtgaagcaggcgagcttgccggccggcctgtccgagaccgcgctcgacgaggtg
cccgatcgtcccggcgtctatctgttctatggtgacgaggacgcgccgctctatgtcggc
aagagcattcacttgcgccagcgcatcaagagccatttctcgggcgaccatcgccacgag
aaggagatgcgcctggcgcggggtgtgcggcgcgtggcgtggcacgaaaccggcggggaa
gtcggcgcgctgctgatggaggcgcagctggtcaagtcactgcagccgctgcacaaccag
ttgctgcgccagaacagcgagctgttctcgtgggaaatgcccgatggcctgcccgtgccg
cgcctgcgctcggaccggcacgtggatttcagccgccatgccaatctctatggcgcgttc
ggcagccgcgccgcagcccaggcccgcctgcgcgaactggcggaggaacacacgctctgc
ctgaccacgctgatgcttgagcccacgcaccggcgcggcaatccatgtttcgcgcgacag
ctgcatcgctgcgcgggcgcctgcacgggcgacgaatcgcgcgcggcgcatcgggaacgg
acgatggccgccatcgccacgctggcgttgcagccgtggccgttcgcgggcgcggtggcg
tggcgggaattggatcatccgcagcagccgtggcacgtgctggagaactggtgctacctc
gggtccgtgccggacctccacgcggcggcggccctgctcgccgtgccggccaggttcgat
gtcgatacctaccagatcctcgcgccgcgcctggatgccctgcgcgcctcagcggtgcca
ctcgcttcgtcccggccgtttgcgctgacgccaccggagccaccgccgcccaggcgcgcc
cccgcttcttctgtcaagcaaccagcccggacaaccgaacgttcctcggatacgcaaacc
ctcaccctgttcgcctga
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