Cupriavidus campinensis: M5D45_28090
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Entry
M5D45_28090 CDS
T08350
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ccam
Cupriavidus campinensis
Pathway
ccam00100
Steroid biosynthesis
ccam00909
Sesquiterpenoid and triterpenoid biosynthesis
ccam01100
Metabolic pathways
ccam01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ccam00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
M5D45_28090
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
M5D45_28090
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ccam01006
]
M5D45_28090
Enzymes [BR:
ccam01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
M5D45_28090
Prenyltransferases [BR:
ccam01006
]
Terpene biosynthesis
Squalene/phytoene synthase
M5D45_28090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
RhiE-like_linker
Motif
Other DBs
NCBI-ProteinID:
URF06926
UniProt:
A0AAE9L4R7
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All DBs
Position
2:2315420..2316469
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AA seq
349 aa
AA seq
DB search
MPIPDRVFLLGPLLKGVSRSFYLTLRILPAGMRDPVGLAYLLARAADTIADTALIPPPQR
LALLLALRARVNGADDGGELVRRLAAEVASQQTLSDEKVLLESIGPALDVLDQLPDADRT
AVRGIVTTLTEGMELDLRTFPDEGSGQVAALPAMADLDRYTYLVAGCVGEFWTTMTVRHQ
PGTLPAPADLMLRRGVRFGKALQMVNVLRDCGKDLRIGRCYLPTELLDRHGLSPQDLLDP
ANSRRARPMLAEGVRVALDHFREAIAYTLAIPRTAVRLRLACIWPILIGLETLLLLVDND
AWLDPARVSKVPRGKVYRVLAGSLACVMVDTALRGWMEGLVARIEARLA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgccaattcctgaccgggttttcctgctcggcccgctgctgaagggggtgtcccgctcg
ttctacctgacgctgcgcatcctgcccgccggcatgcgcgaccccgtggggctcgcctac
ctgctggcccgcgcggcggacaccatcgccgatacggcgctgattcccccgccgcagcgg
ctggcgctgctgctggcgctgcgcgcccgcgtgaacggtgccgatgacgggggcgagctg
gtccgccgactggccgccgaggtcgccagccagcaaaccctgtcggacgaaaaggtgctg
ctggagtcgatcggcccggccctcgacgtgctcgaccagctgcccgacgccgaccgcacc
gccgtgcgcggcatcgtgaccaccctgaccgagggcatggaactcgacctgcgcaccttc
ccggacgaaggctccgggcaggtggcggcattgcccgccatggccgatctcgaccgctat
acctatctggtggccggctgcgtgggcgaattctggaccacgatgacggtccggcatcag
ccgggcacgctgccggcgccggccgacctgatgctgcgccggggcgtgcgcttcggcaag
gccttgcagatggtcaacgtgctgcgcgactgcggcaaggacctgcgcatcggccggtgc
tacctgccgaccgagctgctggaccggcatgggctgtcgccgcaggatctgctggacccg
gccaacagccgccgcgcccggccgatgctggcggagggcgtgcgcgtggcgctcgaccat
ttccgcgaggccatcgcctacacgctggccatcccccgcacggccgtgcggctgcggctg
gcctgcatctggccgatcctgatcggactggaaacgctgctgttgctggtggacaacgac
gcctggctcgatccggcgcgtgtctccaaagtcccgcgcggcaaggtctaccgggtgctg
gcgggcagcctagcgtgcgtcatggtcgataccgcgctgcggggctggatggaagggctg
gtagcgcgcatcgaggcccggctggcctga
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