Castor canadensis (American beaver): 109675248
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Entry
109675248 CDS
T04791
Symbol
Sox3
Name
(RefSeq) transcription factor SOX-3 isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccan03000
]
109675248 (Sox3)
Transcription factors [BR:
ccan03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109675248 (Sox3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109675248
NCBI-ProteinID:
XP_020007593
UniProt:
A0A8C0WRD8
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MRPSQDNASGASSLRVPADLERSSSASLSFSPDPLAHRPPSALPTESPGLFTVAAPAPGA
PSPPATLAHLLPAPAMYSLLETELKNPVGPPTSAAGSGGPAAPGGAGKSSANPAGGANTG
GGGSGGASGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLL
TDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGAAAAAAA
AAAAAAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLGYAQPPSMSSPPPPPALPQMHR
YDMAGLQYSPMMPPGAQSYMNAAAAAAAASGYGGMAPSAAAAAAAAYGQQPATAAAAAAA
AAAMSLGPMGSVVKSEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADAASPLPGG
RLHGVHQHYQGAGTAVNGTVPLTHI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccatctcaagacaacgcatcaggtgcgagtagcctgcgggttcctgctgacttg
gagcggagcagttcggcaagtctgtccttctcgcccgacccgctggcccaccggccccca
agcgcccttccgacggagtccccgggccttttcaccgtggccgctccagccccgggagcg
ccttctcctcctgccacgctggcgcatcttcttcccgccccggcaatgtacagcctgctg
gagactgagctcaagaaccctgtagggccgcccacctcagcagcgggctcgggcggcccc
gcagccccaggtggtgctggcaagagtagcgcgaacccagccggcggcgcgaacacaggc
ggcggcggcagcggtggcgcgagcggcggtggcgggggcagcgaccaggaccgcgtaaag
aggcccatgaacgctttcatggtgtggtcccgcgggcagcggcgcaagatggccctggag
aaccccaagatgcacaactctgagatcagcaagcgattgggcgccgactggaaactgctg
accgacgccgaaaagcgaccgttcatcgacgaggccaagcgactgcgcgcggtgcacatg
aaggagtacccggactacaagtaccggccgcgccgcaagaccaagacactgctcaagaag
gacaagtactctctgcccggcggcctgctgccccccggcgcggctgcagccgcagccgct
gctgccgccgccgccgccgccagcagcccagtgggcgtgggccagcgcctggacacgtac
acacacgtgaacggctgggccaacggcgcgtactcactggtgcaggagcagctgggctac
gcgcagcccccgagcatgagcagcccgccaccgccgccggctttgccgcagatgcaccgc
tacgacatggccggcctgcagtacagccctatgatgccacccggcgcccagagctacatg
aacgccgcggccgcggccgctgccgcctcgggctacgggggcatggcgccctcggccgcc
gccgctgcggccgccgcctacgggcagcagcccgccaccgctgctgccgcagccgccgct
gccgccgccatgagcctgggccctatgggctccgtggtgaagtcggagcccagctcgccg
ccgcccgccatcgcgtcgcactcgcagcgcgcctgcctaggcgacctgcgcgacatgatc
agcatgtacctgccacccggcggggatgcggctgacgccgcctctccgctgcccggcggc
cgcctgcacggcgtgcaccagcactaccagggcgccgggactgcggtcaacggaacggtg
ccgctgacccacatctga
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