Castor canadensis (American beaver): 109676201
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Entry
109676201 CDS
T04791
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03410
Base excision repair
ccan04140
Autophagy - animal
ccan04217
Necroptosis
ccan04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109676201
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109676201
09143 Cell growth and death
04217 Necroptosis
109676201
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
109676201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccan03036
]
109676201
03400 DNA repair and recombination proteins [BR:
ccan03400
]
109676201
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccan04147
]
109676201
Chromosome and associated proteins [BR:
ccan03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
109676201
DNA repair and recombination proteins [BR:
ccan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
109676201
MMR (mismatch excision repair)
Other MMR factors
109676201
Exosome [BR:
ccan04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
109676201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
109676201
NCBI-ProteinID:
XP_020008286
UniProt:
A0A250YCD0
LinkDB
All DBs
Position
Unknown
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaagatgtcatcatatgcattcttcgtg
caaacttgccgggaggagcacaagaagaagcaccccgacgcttcagtcaacttctcagag
ttttctaagaagtgttcggagaggtggaagaccatgtctgctaaagagaaagggaaattt
gaagacatggcaaaggcggacaaggctcgttatgaaagagaaatgaaaacttatattcct
cctaaaggggagacgaaaaagaagttcaaagatcccaatgcacccaagaggcccccttcg
gctttcttcttgttctgttctgagtatcgccccaaaatcaaaggtgagcatcccggcctg
tccattggcgatgttgcaaagaagctgggagagatgtggaacaacactgctgcagatgac
aagcagccttatgaaaagaaggcagccaagctgaaggaaaagtatgaaaaggatattgct
gcctatcgagctaaaggaaaacctgatgcagcgaaaaagggagttgtcaaggctgaaaag
agcaagaaaaagaaggaagaggaggaagatgaggaggacgaagaggatgaggaagaggag
gaagacgaagaagatgaagatgaagaagaagatgatgatgatgaataa
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