Castor canadensis (American beaver): 109676411
Help
Entry
109676411 CDS
T04791
Symbol
Slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
109676411 (Slit2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccan00536
]
109676411 (Slit2)
Glycosaminoglycan binding proteins [BR:
ccan00536
]
Heparan sulfate / Heparin
Axon guidance molecules
109676411 (Slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
EGF
Laminin_G_1
LRR_4
Laminin_G_2
LRR_5
LRRCT
hEGF
LRR_9
EGF_TEN
LRRNT
LRR_1
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
109676411
NCBI-ProteinID:
XP_020008418
UniProt:
A0A8B7TLI7
LinkDB
All DBs
Position
Unknown
AA seq
1332 aa
AA seq
DB search
MPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQKREFVC
SGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPP
GAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLL
LLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH
LKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYRSKLS
GDCFADLACPEKCRCEGTTIDCSNQKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKKL
PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNR
ISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGE
WLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLSRCPTECTCLDTV
VRCSNKGLKVLPKGIPRDVTELYLDGNQFTLIPRELSNYKHLTLIDLSNNRISTLSNQSF
SNMTQLLTLILSYNRLRCIPSRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIG
ANPLYCDCNIQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQGPVDVNILA
KCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDVPIHACISNPCKHGGTCHLKEG
EKDGFWCICADGFEGENCEVNVDDCEDNDCENNSTCVDGVNNYTCLCPPEYTGELCEEKL
DFCAQDLNPCQHDSKCILMPKGFKCDCTPGYIGEHCDIDFDDCQDNKCKNGAHCTDAVNG
YTCICPEGYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQCIIRINEPICQCLPGYQGEKCE
KLVSVNFVNKESYLQIPSAKVRPQTNITLQIATDEDSGILLYKGDKDHIAVELYRGRVRA
SYDTGSHPASAIYSVETINDGNFHIVELLALDQSLSLSVDGGSPKIITNLSKQSTLNFDS
PLYVGGMPGKNNVASLRQAPGQNGTSFHGCIRNLYINSELQDFQKVPMQTGILPGCEPCH
KKVCAHGTCQPSSQSGFTCECEEGWMGPLCDQRTKDPCLGNKCVHGTCLPINAFSYSCKC
LEGHGGVLCDEEEDLFNPCQTIKCKHGKCRLSGLGQPYCECTSGYTGDSCDREISCRGER
IRDYYQKQQGYAACQTTKKVSRLECKGGCAGGQCCGPLRSKRRKYSFECTDGSSFVDEVE
KVVKCGCMRCVS
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacttaggacttttcgactccattcgaacaacctgtattgtgactgccacctt
gcctggctctccgactggctccgacaaagacctcgggtgggcctgtacactcagtgcatg
ggtccttcccacttgaggggccataacgtagcagaggttcagaaacgagaatttgtctgc
agtggtcaccagtcatttatggctccatcttgtagtgttttgcactgccctgctgcttgt
acctgcagtaacaatatcgtagactgccgtgggaagggactcactgagattcccacaaat
ctgccagagaccatcactgaaatacgtttggaacagaactcaatcaaggtcatccctcct
ggagctttctcaccgtataaaaagctcagaagaattgacctgagcaataatcagatctct
gaacttgcaccagatgccttccaaggactacgctccctgaattcactcgtcctttatggg
aataaaatcacagaactcccaaaaagtttgtttgaaggactattttccttacagctacta
ttattgaatgccaacaagatcaactgccttcgggtagatgcttttcaggatctgcacaac
ttgaaccttctctccttatatgacaacaagcttcagaccattgccaaaggcaccttttca
cctctccgggccatccagactatgcatttggcccagaacccctttatttgtgactgccat
ctcaagtggctagcggattatctccataccaaccccattgagaccagtggtgcccgctgc
accagcccccgccgtctggcaaacaaaagaattggacagatcaaaagcaagaaattccgt
tgttcagctaaagaacaatatttcattccaggcacagaagattatcgatcaaaattaagc
ggagactgctttgcagatctggcttgccctgaaaagtgccgctgtgaagggaccacaata
gattgctccaatcaaaaactcaacaaaatcccagaccacatcccccagtacactgcagag
ctgcgtctcaataataatgaattcacagtgttggaagccacaggaatctttaaaaaactt
cctcaattacgtaaaatcaattttagcaacaataaaatcacagatattgaggagggagcc
tttgaaggagcatctggggtaaatgaaatacttctcacgagtaaccgtttggaaaatgtg
cagcataagatgttcaaaggattggaaagcctcaaaactttgatgttgagaagtaatcga
atcagctgtgtggggaatgacagtttcataggactcagttctgtgcgcttgctttcttta
tatgataatcaaattactacgattgcaccaggggcatttgatactctccattccttatct
actctaaacctcttggccaatccgtttaactgtaactgctacctggcatggttgggagag
tggctcaggaagaaaaggattgtaacaggaaatcctcgatgtcaaaaaccatacttcctc
aaagaaatcccaatccaggatgtggccattcaggacttcacttgcgatgacggaaacgat
gacaatagttgttctccactctctcgttgtcccacggaatgtacttgcttggatacagta
gtccgatgtagcaataagggcttgaaggtcttgccgaaaggtattccaagagatgtcaca
gagttgtatctggatgggaaccaatttacactgatccccagggaactctctaactacaaa
catttaacacttatagacttaagtaacaaccgaataagcaccctttccaatcagagcttc
agcaacatgacgcagcttctcaccttaattcttagttacaaccgactaagatgtattcct
tctcgaaccttcgatggattgaagtctcttcgattactttctctacacggaaatgacatt
tctgttgtccccgaaggagctttcaatgatctttctgcattatcacacctagcgattggg
gccaaccctctttactgtgattgtaatatccagtggttatccgactgggtgaagtcagaa
tacaaggagccaggaattgctcgctgtgctggtcctggagaaatggcagataaactgtta
ctcacaactccttccaaaaaatttacatgtcaaggtcctgtggatgtgaatattttagct
aaatgtaatccctgcttatcaaatccatgcaaaaatgatggcacttgtaacaatgatcca
gttgacttttatcgatgtacctgtccttatggtttcaaggggcaggactgtgatgttcca
attcatgcatgcatcagtaacccatgtaaacatggaggaacttgccacttaaaagagggg
gaaaaagatggattctggtgtatttgtgctgatggatttgaaggagaaaactgtgaagtc
aatgttgatgactgtgaagacaatgactgcgaaaataactccacatgtgttgatggagtt
aacaactacacatgtctctgcccacctgagtacacaggtgagctgtgtgaagagaagctg
gacttctgtgcccaggacctgaacccttgtcagcacgactccaagtgcattctcatgcca
aagggattcaagtgtgactgtacaccgggatacattggggagcactgtgacatcgacttt
gatgactgccaagataacaagtgtaaaaatggtgcccactgcactgatgcagtgaacggc
tacacgtgcatctgtcccgaaggttatagtggcttgttctgtgagttttctccacccatg
gtcctccctcgtactagcccctgcgataattttgactgtcagaatggagctcagtgcatc
atcaggataaatgagccaatctgtcagtgtttgcctgggtaccagggagagaagtgtgaa
aaattggtcagtgtgaattttgtaaacaaagaatcttatcttcaaattccatcagccaag
gttcggcctcagacaaacatcacacttcagattgccacagatgaagacagtggcatactc
ctttataagggtgacaaagaccatatcgccgtggaactctaccgagggcgagttcgagcc
agctatgataccggctctcacccagcttctgccatttacagtgtggagacgatcaatgat
ggaaacttccacattgtggagctgctcgccctggatcagagtctctccctctctgtggat
ggagggagcccaaaaatcatcaccaacttgtcaaaacagtccactctgaattttgactcc
ccactctatgtaggaggcatgcctggaaagaacaatgtggcgtctctgcgccaagcgcca
gggcagaatggcaccagcttccacggctgcatccggaacctttacatcaacagtgagctg
caggacttccagaaggtgcccatgcaaacaggcattctgcctggctgtgagccatgccac
aagaaagtgtgtgcccatggcacgtgccagcccagcagtcagtcaggcttcacctgcgag
tgtgaagaaggatggatggggcctctctgtgatcagcgaaccaaggacccctgtcttgga
aataaatgtgtacatggcacctgcttgcccatcaacgcattctcctacagctgtaaatgc
ctggagggccatggaggtgtcctctgtgatgaagaggaggatctgtttaacccctgccag
actatcaagtgcaagcatgggaagtgcaggctctcgggccttgggcagccctactgtgag
tgcaccagtggatacactggggacagctgtgatcgagaaatctcttgtcgaggagagcgg
ataagagattattatcaaaagcagcagggctatgccgcctgtcaaacaaccaaaaaggtc
tcccgcttggaatgcaaaggcgggtgtgcaggcgggcagtgctgtggacctctgaggagc
aagaggaggaaatactctttcgaatgcacggacgggtcttcatttgtggatgaggttgaa
aaggtggtgaagtgtggctgtatgagatgcgtgtcctaa
DBGET
integrated database retrieval system
