Castor canadensis (American beaver): 109677699
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Entry
109677699 CDS
T04791
Symbol
Nefm
Name
(RefSeq) LOW QUALITY PROTEIN: neurofilament medium polypeptide
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan05014
Amyotrophic lateral sclerosis
ccan05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
109677699 (Nefm)
05022 Pathways of neurodegeneration - multiple diseases
109677699 (Nefm)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccan04812
]
109677699 (Nefm)
Cytoskeleton proteins [BR:
ccan04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
109677699 (Nefm)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
ATG14
DUF1664
Motif
Other DBs
NCBI-GeneID:
109677699
NCBI-ProteinID:
XP_020009134
UniProt:
A0A8B7TN54
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MSYTLDSLGNPSAYRRVTETRSSFSRVSGSPSSGFRSQSWSRGSPSTVSSSYKRSALAPR
LAYSSAMLSSAESSLDFSQSSSLLNGGSGGDYKLSRSNEKEQLQGLNDRFAGYIEKVHYL
EQQNKEIEAEIQALRQKQASHAQLGDAYDQEIRELRAALEMVNHEKAQVQLDSDHLEEDI
HRLKERFEEEARLRDDTEAAIRALRKDIEESSMVKVELDKKVQSLQDEVAFLRSNHEEEV
ADLLAQIQASHITVERKDYLKTDISTALKEIRSQLECHSDQNMHQAEEWFKCRYAKLTEA
AEQNKEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNHDLSSYQDT
IQQLENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTFSGSITGP
LYTHRQPSVTISSKIQKTKVEAPKLKVQHKFVEEIIEETKVEDEKSDMEDALTAIAEELA
VSAKEEEKEEAEEKEEEKEAEEEVVAAKKSPVKALAPEIKEEEEGEKEXEKGQEEEEEED
EGVKSDQAEEGGSEKEGSSEKDEGEQEEEGETEAEGEGEEAEAKEEKKIEEKGEGVAAKE
ELVAEAKVEKPEKAKSPVPKSPVEEVKPKAEVKAGKGEQKEEEEKVEEEKKEVAKEAPKE
EKVEKKEKPKDVPDKKKAESPVKEKAVEEVITITKSVKVSLEKDTKVEEKPAQQEKEKIE
EGGGSEEEGSDQGAKESRKEDIAVNGEVEGKEEEEQETKEKGSGREEEKGVVTNGLDLSP
ADEKKGGDKSDEKVVVTKMVEKITSEGVGDGATKYITKSVTVTQKVEEHEETFEEKLVST
KKVEKVTSHAIVKEVTQSD
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgagctacactctggactcgctgggcaacccgtccgcctaccggcgggtaacggagacc
cgctccagcttcagccgggtcagtggctccccgtccagcggcttccgctcgcagtcgtgg
tcccgcggctcgcctagcaccgtgtcgtcctcctacaagcgcagcgcgctcgccccgcgc
ctcgcctacagctcggccatgctcagctcggccgagagcagcctggacttcagccagtcc
tcgtccctgctcaacggcggctccggcggcgactacaagctgtcccgctccaacgagaag
gagcagctgcaggggctgaacgaccgcttcgccggctacatcgagaaggtgcactatttg
gagcagcagaacaaggagatcgaggcggagatccaggcgctgcggcagaagcaggcctcg
cacgcgcagctgggcgacgcgtacgaccaggagatccgcgagctccgagccgccctggag
atggtgaaccacgagaaggcgcaagtgcagctggactccgaccacctggaggaggacatc
caccggctcaaggagcgcttcgaggaggaggcgcggctgcgcgacgacaccgaggcggcc
atccgcgcgctgcgcaaagacatcgaggagtcgtcgatggtcaaggtggagctggacaag
aaggtacagtcgctgcaggatgaggtggccttcctgcgcagcaatcacgaagaggaggtg
gcggacctgctggcgcagatccaggcgtcgcacatcaccgtggagcgcaaagactacctg
aagaccgacatctccaccgcgctgaaagagatccgctcccagctcgagtgccactccgac
cagaacatgcaccaggccgaagaatggtttaagtgccgctatgccaagctcaccgaggcg
gccgagcagaacaaggaggccatccgctccgccaaggaagagatcgccgagtaccggcgc
cagctgcagtccaagagcatcgagctcgagtccgtacgcggcaccaaggagtccctagag
cggcagctcagcgacatcgaggagcgccacaaccacgacctcagcagctaccaggacacc
atccagcagctggaaaatgagcttcggggaacgaagtgggaaatggctcgtcacctgcga
gagtaccaggacctcctcaacgtcaagatggccctggatatcgagatcgctgcgtacaga
aaactcctggagggtgaagagacaagatttagcacgttttcggggagcatcactgggccg
ctgtatacacaccgacagccctcagtcacaatatctagtaagatccagaaaactaaggtt
gaagctcccaagctcaaggtccaacacaaatttgtggaggagatcatagaggagaccaaa
gtggaggatgagaagtccgacatggaagatgccttgacagccattgcagaggagttggcc
gtttccgcaaaagaagaagagaaggaagaggcagaagaaaaggaagaggaaaaagaagct
gaagaagaagtggtggctgccaaaaagtctccagtgaaagctttggcacctgaaattaaa
gaagaggaagaaggggaaaaggagngagaaaaaggccaggaggaagaagaagaagaagat
gagggtgtcaagtcagaccaagctgaagagggaggatccgagaaggaaggctccagtgaa
aaagatgaaggtgagcaggaagaagaaggagaaaccgaggctgaaggtgaaggagaagaa
gccgaagctaaagaagaaaagaaaatcgaggaaaagggtgaaggagtggctgccaaagag
gagctggtggcagaagccaaggtggaaaagccagagaaagccaagagccctgtgccaaaa
tcacctgtggaagaggtgaagccaaaagcagaagtgaaagctggaaaaggtgaacagaaa
gaggaagaagagaaagttgaggaagaaaagaaagaagtagccaaggaagctcccaaggaa
gagaaggtagagaaaaaggagaagccaaaagatgtaccagacaagaagaaagccgagtcc
ccagtgaaggagaaagcagtagaagaggtgatcaccatcaccaaatcagtaaaggtgagc
ctagagaaagataccaaagtggaggagaagccagcacagcaagagaaggagaaaatagaa
gaggggggagggagtgaggaggaaggaagtgatcaaggtgcaaaggaatcccggaaggaa
gacatagctgtcaatggggaggtagaaggaaaagaggaggaagagcaggaaactaaggaa
aaggggagtgggagagaagaggagaaaggtgtggtcactaatgggttagacttgagccca
gcagatgaaaagaaggggggtgacaaaagtgatgagaaagtggtggtgaccaaaatggta
gaaaaaatcaccagtgagggggtgggtgatggtgctaccaaatacatcactaaatctgta
accgtcacccaaaaggtcgaagagcatgaagagacctttgaggagaagctagtgtctact
aaaaaggtagaaaaagtcacttcacacgccatagtaaaggaagtcacccagagtgactaa
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