Castor canadensis (American beaver): 109678064 Help Entry 109678064         CDS       T04791                                  Symbol Npc1 Name (RefSeq) Niemann-Pick C1 protein   KO K12385   Niemann-Pick C1 protein Organism ccan  Castor canadensis (American beaver) Pathway ccan03265   Virion - Ebolavirus, Lyssavirus and Morbillivirus ccan04142   Lysosome ccan04979   Cholesterol metabolism Brite KEGG Orthology (KO) [BR:ccan00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus     109678064 (Npc1)  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     109678064 (Npc1)  09150 Organismal Systems   09154 Digestive system    04979 Cholesterol metabolism     109678064 (Npc1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02000 Transporters [BR:ccan02000]     109678064 (Npc1) Transporters [BR:ccan02000]  Solute carrier family (SLC)   SLC65: NPC-type cholesterol transporter    109678064 (Npc1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  NPC1_MLD NPC1_N Sterol-sensing Patched MMPL ACR_tran Motif Other DBs NCBI-GeneID:  109678064 NCBI-ProteinID:  XP_020009361 UniProt:  A0A8B7TQV1 LinkDB All DBs Position Unknown AA seq 1277 aa AA seqDB search MSARGQALGFLLMLLCSAKVFSQSCVWYGECGIASGDKRYNCKYSGPPRPLPKDGYDLVQ ELCPGFFFDNVSLCCDVQQLQTLKSNLQLPLQFLSRCPSCFYNLMNLFCELTCSPRQSEF LNVTATEDYVDPVTNQTKTNVKELEYYIGQSFANAMYNACRDVEAPSSNDKALGLLCGKD ADACNATNWIEYMFNKDNGQAPFTITPIFSDFPVHGMEPMRNATKSCNESVDETTGPCSC QDCSIVCGPKPQPPPPPVPWRIFGLDAMYVIMWITYMAFLFVFFGAFFTVWCYRKRYFVS EYTPIDSNIAFSVNASDKGEASCCDQLGAAFESFLRRMFTQWGVFCVRNPGCVIFFSLVF IAASSSGLVFVRVTTNPVDLWSSPNSQARLEKEYFDTHFGPFFRTEQLIIQAPNTSIHIY EPYPSGADVPFGPPLDKEILHQVLDLQTAIENIIASYNNETVTLQDICVAPLSPYNKNCT ILSVLNYFQNSHSMLDHKIMDDFFTYADFHTHFLYCVRAPASLNDTSMLHDPCLGTFGGP VFPWLVLGGYDGQNYNNATALVITFPVNNYYNDTEKLQKAQAWEKEFINFVKNYKNPNLT ISFTTERSIEDELNRESNSDVFTIAISYGIMFLYISLALGHIKSCQRLLVDSKISLGVAG ILIVLGSVACSLGIFSYIGAPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQGETL DQQLGRVLGEVAPTMFLSSFSETSAFFLGALSVMPAVHTFSLFAGMAVFIDFLLQMTCFV SLLGLDIKRQEKNRLDILCCVSSAEDVGSVQASDNFLFHFFKNSYSPLLLKDWMRPVVIA VFVGVLSFSIAVLNKVEIGLDQSLSMPKDSYVIDYFKSLSQYLHSGPPVYFVLEEGHNYT SLQGQNMVCGGMGCDNDSLVQQIFNAAELDNYTRIGFAPSSWIDDYFDWVKPQSSCCRIY NVTDQFCNASVADPSCIRCRPLTPEGKQRPQGRDFMRFLPMFLSDNPNPKCGKGGHAAYS SAVNILGNDTSVGATYFMTYHTVLQTSADYIDALKKARLVAGNITGTMGAKGSNFRVFPY SVFYVFYEQYLTIIDDTIFNLGVSLGSIFLVTMVVLGCDLWSAVIMCVTIAMILVNMFGV MWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRVDRAEEALAHMGSSVFSG ITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSVNKAKRH ATRDRYKGTERERLLNF NT seq 3834 nt NT seq  +upstreamnt  +downstreamnt atgagcgcgcgtggccaggccctgggcttccttctgatgctgctctgttcagcgaaggta ttttcccagtcctgtgtttggtatggagaatgtggaattgcatctggagataagaggtac aattgcaaatattccgggccaccaagaccacttccgaaggatgggtatgacttagtgcag gaactctgtccaggattcttcttcgacaatgtcagtctctgttgtgatgttcagcagctt cagacactaaaaagcaacctgcagctgcctctacagtttctgtccagatgtccatcctgt ttttataatcttatgaacctcttttgtgaactgacatgtagccctcgacagagtgaattt ctgaatgtcacagcaactgaagattatgttgatcctgttacaaaccagacaaaaacaaat gtgaaagaattggagtactatattggacagagttttgccaatgcaatgtacaatgcctgc cgggatgtggaggccccctcaagtaatgacaaggccctgggactcctatgtgggaaggat gctgatgcctgcaatgccaccaactggattgagtatatgttcaataaggacaatggacag gcaccgttcaccatcactcccattttttcagattttccagtccatgggatggagcccatg agaaatgccaccaaaagctgcaatgagtctgtagatgagaccacagggccgtgcagctgc caggactgctctatcgtttgtggtcccaagccccaacccccaccccctcctgttccctgg aggatctttggcttggatgccatgtatgtcatcatgtggatcacttacatggcattctta tttgtattttttggagcattttttacagtgtggtgttatagaaaacgatattttgtgtct gagtacactcccattgacagcaatatagccttttctgtgaacgccagtgacaaaggggag gcttcctgctgtgaccagcttggtgccgcatttgagagctttttgaggcgcatgttcaca cagtggggggtcttctgtgtccgaaaccctggctgtgttattttcttctcactggtcttc attgccgcaagttcttcaggccttgtatttgtccgcgtcaccaccaatcctgtcgacctg tggtcctcccccaacagccaggcccgcctggagaaagagtactttgacacacactttggg cctttctttcggactgagcagcttattatccaggcccccaacaccagcatacacatttat gagccgtacccctcaggagccgacgtgccctttggacctccacttgacaaagagattttg caccaggtgcttgatttacaaacagctattgaaaacataattgcatcttacaacaacgag actgtgacacttcaagacatctgtgtggcccctctatcaccatataacaagaactgcacc attctgagtgtgctaaattacttccagaacagccattccatgctggaccacaaaataatg gatgacttctttacgtatgcagatttccacacgcactttctgtactgtgtacgggctcct gcctctctgaatgatacaagcatgctccatgatccttgcctgggtacatttggaggacca gtgttcccgtggcttgtgctgggaggctatgatggtcaaaactacaataatgccactgcc ctcgtgattaccttccctgtcaataattactataatgacacagagaagctccagaaggcc caggcctgggaaaaagaatttattaattttgtgaaaaactacaagaatccaaatctgacc atttctttcactactgaacgaagtattgaagatgaactgaatcgtgaaagtaacagtgac gtcttcaccatcgcaattagctatggtatcatgtttctgtacatctctctagccttagga cacatcaaaagttgtcaaaggcttctggtggattctaagatctcgctaggcgttgcgggt atcctgatagtgctgggctcggtggcctgctcgctgggcatcttcagttacatcggggcg ccattgaccctcattgtgattgaagtcatcccgttcctggtgctagcagttggggtggac aacatcttcatcctggtgcagacctatcagagagatgaacgtcttcaaggagaaaccctg gatcaacaactgggcagagtcctaggagaagtggctcctactatgttcttgtcatccttt tccgagacttcggcatttttcttaggagcactatcagtgatgccagctgttcatactttc tctctgtttgcgggaatggcagtctttattgacttccttcttcagatgacctgttttgtg agcctcttggggttagacattaagcggcaagagaaaaatcgcctggacatcctgtgctgt gtcagcagtgctgaggatgtaggaagcgttcaggcctcagacaacttcctgtttcacttc ttcaaaaactcctattccccacttctgctgaaggactggatgcgaccagttgtgatagcc gtatttgtgggtgtcctgtcattcagtattgcagtcctgaacaaagtggaaattggattg gatcagtctctttcaatgccgaaggactcctatgtaatagattatttcaaatccctcagt cagtacctacactcggggccacctgtgtactttgtcctggaggaaggtcacaattacact tccctgcaagggcagaacatggtgtgcggtggcatgggctgcgacaatgactccctggtg cagcagatatttaatgcggctgagctggacaactataccaggataggctttgctccttcc tcctggattgatgattattttgactgggttaagccacagtcttcctgctgtagaatctac aatgtcactgaccaattctgcaatgcttcagtggctgatccttcctgcatccgctgcagg cctctgactccagagggcaaacagaggccacagggcagagacttcatgagattcctgccc atgttcctttctgataatcctaaccccaagtgtggaaaagggggacatgctgcgtatagt tcagcagttaacatccttggcaatgacaccagcgtgggagcgacatacttcatgacctac cacaccgtgcttcagacctccgctgactatattgatgccttgaaaaaagcccgacttgtg gctggtaacatcaccggaaccatgggcgctaaaggcagtaatttccgtgtgttcccatac agcgtgttctatgtcttctacgagcagtacctgaccattattgatgacaccatcttcaac ctcggcgtgtccctgggatccatatttctggtgaccatggtggttctgggctgtgacctg tggtctgcggtcatcatgtgtgtcaccattgccatgattctggtcaacatgtttggtgtt atgtggctgtggggcatcagtctgaacgcagtttccttggtcaacttggtgatgagctgt ggcatttctgtggagttctgcagtcacataacaagagcattcacggtgagcacgaaggga agccgcgtggaccgcgcagaagaggcgctggctcacatgggcagttctgtattcagtgga atcacacttacaaaatttggagggattgtggtgttggcctttgccaaatctcaaattttc cagatattttacttcaggatgtatttagccatggtcttactgggagccactcacggacta atatttctccctgtcttactcagttatataggaccatcggtaaataaagctaaaagacat gccactcgagatcgatacaaaggcacagagcgagaacgactcctaaatttctag

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