Castor canadensis (American beaver): 109679968
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Entry
109679968 CDS
T04791
Name
(RefSeq) LOW QUALITY PROTEIN: reelin-like
KO
K06249
reelin [EC:3.4.21.-]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04151
PI3K-Akt signaling pathway
ccan04510
Focal adhesion
ccan04512
ECM-receptor interaction
ccan05017
Spinocerebellar ataxia
ccan05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
109679968
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109679968
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109679968
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
109679968
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
109679968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Reelin_subrepeat-B
EGF_Teneurin
EGF_TEN
BNR
EGF_2
EGF_Tenascin
hEGF
EGF_integrin
Motif
Other DBs
NCBI-GeneID:
109679968
NCBI-ProteinID:
XP_020010591
UniProt:
A0A8B7TU72
LinkDB
All DBs
Position
Unknown
AA seq
1546 aa
AA seq
DB search
WQPQHGKHSAQWALDDVLIGMNDSSQTGFXDKFDGSIDLQANWYRIQGGQVDIDCLSMDT
ALIFTENIGKPRYAXTWDFHVSASTFLQFEMSMGCSKPFSEAHSVQLQYSLNNGRDWHLV
TAECVPPTIGCLHYTESSIYTSERFQNWKRITVYLPLSTNSPRTRFRWIQANYTVGADSW
AIDNVVLAXGCPWMCSGRGICDAGRCVCDRGFGGPYCVPVTPLPSILKDDFNGNLHPDLW
PEVYGAERGNLNGETIKSGTSLIFKGEGLRMLISRDLDCSNTMYVQFSLRFIAKGTPERS
HSILLQFSVNGGITWHLMDEFYFPQTTNILFINVPLPFNAQTNATRFRLWQPYNNGKKEE
IWIVDDFIIDGNNLNNPVMLLDTFDFGPREDNWFFYPGGNIGLYCPYSSKGAPEEDSAMV
FVSNEVGEHSISTHDLSVNENTIIQFEINVGCSTDSSSADPVRLEFSRDFGATWHLLLPL
CYHSSSHVSSLCSTEHHPSSTYYAGTTQGWRREVVHFGKLHLCGSVRFRWYQGFYPAGSQ
PVTWAIDNVYIGPQCEEMCNGHGSCINGTRCICDPGYSGPTCKISTKNPDFLKDDFEGQL
ESDRFLLMSGGKPSRKCGILSSGNNLFFNEDGLRMLMTRDLDLSHARFVQFFMRLGCGKG
VPDPRSQPVLLQYSLNGGLSWSLLQEFLFSNSSNVGRYIALEIPLKARSVSTRLRWWQPS
ENGHFYSPWVIDQILIGGNISGNAVLEDDFTTLDSRKWLLHPGGKMPAVCGSTGDALVFI
EKASTRYVVTTDIAVNEDSFLQIDFAASCSVSDSCYAIELEYSVDLGLSWHPLVRDCLPT
NVECSRYHLQRILVSDTFNKWTRITLPLPPYTRSQATRFRWHQPAPFDKQQTWAIDNVYI
GDGCIDMCSGHGRCIQGSCVCDELWXGLYCDEPETSLPTQLKDNFNRAPSNQNWLTVNGG
KLSTVCGAVASGLALHFSGGCSRLLVTVDLNLTNAEFIQFYFMYGCLITPNNRNQGVLLE
YSINGGITWSLLMEIFYDQYSKPGFVNILLPPDAKEVATRFRWWQPRHDGLDQNDWAIDN
VLISGSADQRTVMLDTFSSAPVPQHERSPADAGPVGRIAFDMFMEDKTEVNEHWLFHDDC
TVERFCDSPDGVMICGSHDGREVYAVTHDLTPTDGWIMQFKISVGCKVSEKIAQNQIHVQ
YSTDFGVSWNYLVPQCLPADPKCSGSVSQPSVFFPTNGWKRITYPLPESFVGNPVRFRFY
QRYSDMQWAIDNFYLGPGCLDNCRGHGDCLKEQCICDPGYSGPNCYLTHSLKTFLKERFD
SEEIKPDLWMSLEGGSTCTECGILAEDTALYFGGSTVRQAITQDLDLRGAKFLQYWGRIG
SENNMTSCHRPICRKEGVLLDYSTDGGITWTLLHEMDFQKYISVRHDYILLPEDALTNTT
RLRWWQPFVISNGIVVSGVERAQWALDNILIGGAEINPSQLVDTFDDEGTSHEENWSFYP
NAVRTAGFCGNPSFHLYWPNKKKDKTHNALSSRELIIQPGYMIQFK
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
tggcagccacaacatgggaagcattcagcccagtgggctctggatgatgtccttatagga
atgaatgacagctctcaaactggattcnaagacaaatttgatggctctatagatttgcaa
gccaactggtatcgaatacaaggaggtcaagttgatattgactgtctctctatggatact
gctctgatattcactgaaaatataggaaaacctcgttatgctngaacctgggattttcat
gtgtcagcatctaccttcttacagtttgaaatgagcatgggttgcagcaagcccttcagc
gaggcccacagtgtgcagctccagtattctctgaataatggcagggactggcatcttgtc
actgcagagtgtgttcctcctaccattggctgtctgcactacacagaaagttcaatttac
acctcagaacgattccagaattggaagcggatcactgtctaccttccactctctaccaat
tctcccaggacccggttcagatggattcaagccaactacactgtgggagctgattcctgg
gctattgataatgttgtactggctncagggtgcccttggatgtgctcaggacgagggatt
tgtgatgctggacgctgtgtatgtgaccgggggtttggtggaccctactgtgttcctgtt
acccctctcccttcaattctgaaagatgatttcaatgggaacttacatcctgacctttgg
cctgaagtgtatggtgctgagagaggcaatctgaatggtgaaaccatcaaatctggaacg
tctctcatttttaaaggggaaggactaagaatgcttatttcaagagatctagattgttcc
aatactatgtatgtccagttttcacttaggtttatagcaaaaggtaccccagagaggtct
cactctatcctcctccagttctctgtcaatggtggaatcacgtggcacctgatggatgaa
ttttacttccctcaaacgaccaatatacttttcattaatgttcccttgccattcaatgcc
caaaccaatgcgacaagattcaggctctggcagccttacaataatggtaagaaagaagaa
atctggattgttgatgacttcattattgatggaaataacttgaacaaccctgtgatgctc
ttggatacatttgattttgggcccagggaagacaactggtttttctacccgggtggtaat
attggtctttattgcccatattcttcaaagggagcacccgaggaagattcagctatggtg
tttgtttcaaatgaagttggtgagcattccatcagcacccatgacctaagcgtgaatgag
aacaccatcatacaatttgagatcaatgttggatgctccactgacagctcatctgctgat
ccagtcagactggaattttcaagggactttggagccacctggcacctgctgcttcccctc
tgctaccacagcagcagccacgtgagctccttatgctccactgaacaccaccccagcagc
acctactatgcagggacaacccagggctggaggagggaggtcgtgcacttcgggaagctg
catctttgcggatctgtgcgtttcagatggtaccaggggttttaccctgctggctctcag
ccagtcacctgggccattgataacgtgtacattggtccccaatgtgaagagatgtgtaat
ggacatggaagctgcatcaatggaaccaggtgtatatgcgatcccggctactcaggtcca
acctgtaaaataagcaccaaaaatcccgattttctcaaggatgactttgaaggtcaacta
gaatctgatagattcttattaatgagtggtggaaagccatctaggaagtgtggaatcctt
tccagtggaaacaacctttttttcaatgaagatggcttacgcatgttgatgacacgagac
ctggatttgtcacatgctagattcgtgcagttcttcatgagactgggatgtggtaaaggt
gttccagaccccaggagccagcctgtgcttctacagtattctctcaatggtggcctctcc
tggagtcttcttcaagagttccttttcagcaactccagcaatgtgggcaggtacattgcc
ctggagatacccttgaaagcccgttccgtttctactcgcctgcgctggtggcagccatct
gaaaatgggcacttctacagcccttgggttatcgaccagatacttattggaggaaatatt
tctggtaatgcagtcttggaagatgattttacaactctggatagtagaaagtggctgctt
cacccaggaggcaagatgccagctgtgtgtggctctactggagatgccctggtcttcatt
gagaaggccagcactcgttatgtggtcaccacagacattgctgtgaatgaggactctttc
ctacagattgattttgctgcctcctgctcagtctcagactcttgctatgctattgaattg
gaatactcagtggatcttggattgtcatggcacccgttggtgagggactgtctgcctacc
aatgttgaatgcagtcgctatcacctacagcggatcctggtgtcagatactttcaacaag
tggaccagaatcactctgcctcttcctccttataccaggtcccaggccactcgtttccgt
tggcatcaaccagctccttttgacaagcagcagacatgggcaatagataacgtctatatt
ggggatggctgcatagacatgtgcagtggccatgggaggtgtatccagggcagctgtgtc
tgtgatgagttatggngtggcctgtactgtgatgagcctgagacttcccttccaacccaa
ctcaaagacaacttcaatcgagcaccctctaatcagaactggctgactgtgaatggcggg
aaactgagtactgtgtgtggagctgtggcttcagggctggctctccatttcagtgggggt
tgtagtcgattgttagtcactgtggatctaaaccttactaatgctgagtttatccagttc
tacttcatgtacggatgtctgatcacaccaaacaaccgtaatcaaggtgttctcttagaa
tattccatcaatggaggcatcacctggagcttgctaatggaaatcttctatgaccagtac
agtaaacctggatttgtcaatattcttctccctcctgatgctaaagaggttgctactcgc
ttccgctggtggcagccaagacatgatggcctagaccagaatgactgggccattgacaat
gtcctcatctcaggctctgcagaccagaggactgtcatgttagacaccttcagcagtgct
ccagtgccccagcatgagcgctctcctgcagatgccggccctgttgggagaattgctttt
gacatgtttatggaggacaaaactgaagtgaatgagcattggctcttccacgatgattgt
acagtagaaagattctgtgactcccctgatggtgtcatgatctgtggcagtcatgatgga
cgagaggtgtatgcagtgacccatgacttgactcccactgatggctggattatgcaattc
aagatctctgttggatgcaaagtgtctgaaaaaattgcccagaatcaaattcatgtgcag
tattctactgactttggtgtaagctggaattatctggtccctcagtgcttacctgctgac
ccaaagtgctctggaagtgtttctcagccatctgtattctttccaactaatggctggaaa
aggatcacctacccacttcctgaaagctttgtgggaaacccggtcaggtttaggttctat
cagaggtactcagatatgcagtgggcaattgacaatttctacctgggccctggatgcttg
gacaactgccgaggccatggagattgcctaaaggaacagtgcatctgcgatccgggatac
tctgggccaaactgctacttaacgcactctctaaagactttcctgaaggaacgctttgac
agtgaagaaattaagcctgacttgtggatgtccttagaaggcggaagtacttgtactgag
tgtggaattcttgcagaggacacagctctctattttgggggatccactgtgagacaagct
attactcaagacttggatctcagaggtgcaaaattcctgcaatactggggacgcatcgga
agtgagaataacatgacctcttgccatcggcccatctgccggaaggaaggcgtgctgctg
gactactctactgatggaggaatcacttggactttgctccatgagatggatttccagaaa
tatatttctgttagacatgactatatacttctcccagaggatgccctcaccaacacaact
cgacttcgttggtggcagccatttgtgatcagcaatgggattgtggtctctggggtggag
cgggctcagtgggcactggataacattctgatcggtggagcagaaatcaatcccagtcag
ctggtggacacttttgatgatgaaggcacttcccatgaagaaaactggagcttttaccct
aatgcagtaaggacagcaggattctgtggcaatccgtccttccacctctactggccaaat
aaaaagaaggacaagactcacaatgctctctcctcccgagaactcattatacaaccagga
tacatgatacaatttaaa
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integrated database retrieval system