Castor canadensis (American beaver): 109680115
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Entry
109680115 CDS
T04791
Symbol
Trpa1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
109680115 (Trpa1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccan04040
]
109680115 (Trpa1)
Ion channels [BR:
ccan04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109680115 (Trpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
109680115
NCBI-ProteinID:
XP_020010675
UniProt:
A0A8B7TZ68
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MKRSLRKMLRPAEKKEPQGVNYQGVGDSMDDSFKVDFEGNTYRLQNFIKNLKKVGKYEDT
SVSPLHHAAAEGQVELMRMIISGSSCEVLNAMDDYGNTPLHWAAENNQVESVKFLLSQGA
NPNLRNSHMMAALHIAVQGMHNEMTKVLTEHSSTNVDLEGENGNTAVLTTCTKDNSEALQ
ILLNKGAKLCKSNKWGDYPVHQAAFSGATKCMELILKYGEKCGYSRQSHINFVNNKKASP
LHLAVQSGDLEMIKMCLDNGAHIDLKENGKCMALHFAATQGATEIVKLMISSYSGSSDIV
NAVDGNHETLLHRASLFDHHDLADYLISVGADINITDSEGRSPLILATASASWNIVNLLL
SKGAKVDIKDHLGRNFLHLTVQQPYGLKNLRPEFLQMQHIKELVMDEDNDGCTPLHYACR
QGVPVSVNNLLGFNVSIHSKSKDKKSPLHFAASYGRINTCQRLLQDISDTRLLNEGDLHG
MTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASLGGYTQTMKVILDTNLKCTD
RLDEEGNTALHFAAREGHAKAVALLLNYDADILLNKQQASFLHIALHNKRKEVVLTTIRS
KRWDECLKVFMHCSPCNKCPIMEMVEYLPECMKFLLDFCMIPSTEDKSCRDYHIEYNFRY
LQCPLEFTRNEKPTHEVRYEPLSILNVMVQHNRIELLNHPVCKEYLLMKWCAYGFRAHMM
NLGSYCLGLIPMTLLVVNIKPGMAFNSTGIINETNNHLEKLDTTNSYPIKVCMVLVFLSS
IFGYCKEVIQIFQQKRNYFLDYNNALEWIIYTTSIIFVLPLFVSIPAYVQWQCGAIAIFF
YWMNFLLYLQRFENCGIFIVMLEVIFKTLLRSTGVFIFLLLAFGLSFYVLLNLQDAFSSP
LLSIVQTFSMMLGDINYRDAFLEPFLRKQLAYPTLSFAQLIVFTMFVPIVLMNLLIGLAV
GDIAEVQKHASLKRIAMQVELHTSLEKKLPLWFLRKVDQKSTIVYPNRPRHGKILRLFNY
FFGTQETRQEIPNADTCLEMEILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISETEDED
NHCSFQDRFKKERLEQMNSKWNFVLKAVKTKTHSPKH
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagcctgaggaagatgctgcgcccagcggagaagaaggagccccagggcgtt
aactaccagggcgtgggcgacagcatggatgactcgtttaaggtggattttgaaggaaat
acatatagattgcaaaactttatcaagaaccttaaaaaagtaggcaaatatgaggataca
agcgtctctcctttgcatcacgcagcagcagaaggtcaagttgagttgatgaggatgatc
atcagtgggtcatcttgtgaagtgctgaatgcaatggacgattatggcaatactcctctg
cactgggctgcagagaacaaccaggttgaaagcgtgaagtttcttctcagccaaggagca
aacccaaacctccgaaacagtcacatgatggcagcccttcacatagccgtgcagggcatg
cacaatgagatgaccaaggtcttgactgaacacagtagtactaatgttgatttggaagga
gaaaatggaaacacagctgtgttaaccacatgcaccaaagataatagtgaggcactacaa
attttgttaaataaaggagctaagttgtgtaaatcaaacaagtggggagattaccctgtt
caccaggctgccttttcaggtgccacaaaatgcatggaactcatattaaagtatggtgaa
aaatgtggctacagtagacagtctcacattaactttgtgaataacaagaaagccagcccg
ctccacctggcagtccagagcggtgacttggaaatgattaaaatgtgcctggacaatggc
gcgcacatagacctgaaggagaatggcaagtgcatggccctgcattttgctgcaacccag
ggagccacggagattgttaaactgatgatctcatcctactctgggagcagcgacattgtc
aacgcggtggatggaaatcatgagacactgcttcacagggcctcattatttgatcaccat
gacctagcagactacttaatttcagtgggagcagatatcaacattactgattcagaagga
cgctctccactgatactagcaactgcttctgcatcttggaatattgtaaatttgctactc
tctaaaggtgccaaggtagacataaaagatcatcttgggcgtaattttttacatttgact
gtacagcaaccttacggattaaagaatctgagacctgagtttttgcagatgcagcatatc
aaggagctggtgatggatgaggacaatgatggatgcactcctctacattacgcatgtaga
cagggggtccctgtctctgtaaataacctccttggttttaatgtgtccattcattccaaa
agcaaagataagaagtcacctctgcattttgcagccagttatgggcgtatcaatacctgt
cagaggctcctccaggatatcagtgatacaaggcttttgaatgaaggggatcttcacggc
atgactccactccatctggcagcaaaaaacggacatgacaaagtagttcaactgcttctg
aaaaaaggtgcactgttccttagtgaccacaatggctggactgctttgcatcatgcttcc
ttgggtgggtacactcagaccatgaaggtcattcttgatactaatttgaagtgcacagat
cggctagatgaagaagggaacacggcgctccactttgcagcacgggaagggcacgctaaa
gctgttgcacttcttctgaactacgatgctgacatcctcctgaataagcagcaggcttct
tttctgcacatcgcacttcataataagaggaaggaggtggttcttaccaccatcaggagc
aaaagatgggatgaatgtcttaaggtttttatgcattgttcgccatgcaataaatgccca
atcatggaaatggtagaatacctccctgaatgcatgaaatttcttttagatttctgcatg
ataccttccacagaggacaaatcctgccgagactaccacattgaatataatttcagatat
cttcaatgtccactagaatttaccagaaatgagaaacctacacacgaagttagatatgag
cctctttcaatcctcaatgttatggtacaacacaaccgtatagagcttctcaatcatcct
gtgtgtaaagaatatttactcatgaaatggtgtgcctatggattcagagcccatatgatg
aacctaggatcttattgtcttggcctaataccaatgacccttcttgttgtcaatataaag
ccaggaatggctttcaactcaactggaatcatcaatgaaactaataatcatttagaaaaa
ttagacactacgaattcatacccaataaaagtttgtatggttttagtctttttatcaagt
atatttggatactgcaaagaagtaatccaaattttccagcagaaaaggaattacttcctg
gattacaacaatgccttagagtggattatctacacaaccagcatcatttttgtgctgccc
ttatttgtcagcataccagcatatgttcagtggcaatgcggagcaattgcaatattcttc
tattggatgaacttcttgttgtaccttcaaaggtttgaaaattgtggaatattcattgtt
atgttggaggtaatttttaaaactttgttgagatcgacaggagtatttatcttcctactt
ttggcttttggactcagcttttatgtcctcctgaatttgcaggatgccttcagctctcca
ttactttccatagtccagaccttcagcatgatgctaggagatatcaattatcgagatgcc
ttcctagagccatttttgagaaaacaattagcatatccaactctgtcctttgcacaactt
attgtctttacaatgtttgtcccaattgtcctcatgaatttacttattggtttggcagtt
ggtgacattgctgaggtccagaagcatgcatcattgaagaggattgctatgcaggtggaa
cttcacaccagcttagagaaaaagctgccactctggttcttacgcaaagtagatcagaag
tccactatcgtgtatcccaacagaccaagacatgggaagatattacgtttatttaattat
ttttttggtacccaagaaacaagacaagaaataccaaatgctgacacatgtttagaaatg
gagatattgaaacagaaataccggctgaaggacctcacttctctcttggaaaagcagcat
gagctcattaaactcatcattcagaagatggagatcatttctgagacagaggatgaagat
aaccactgttcttttcaagacaggttcaaaaaagagcggctagaacaaatgaatagcaaa
tggaattttgtgttgaaagcagttaagacaaagacacacagtcctaagcattag
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integrated database retrieval system
