Castor canadensis (American beaver): 109681243
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Entry
109681243 CDS
T04791
Symbol
Srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03013
Nucleocytoplasmic transport
ccan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109681243 (Srrm1)
03015 mRNA surveillance pathway
109681243 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109681243 (Srrm1)
03041 Spliceosome [BR:
ccan03041
]
109681243 (Srrm1)
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109681243 (Srrm1)
Spliceosome [BR:
ccan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
109681243 (Srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
109681243
NCBI-ProteinID:
XP_020011479
UniProt:
A0A8C0XH47
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKIKEPSVQEATS
TSDILKVPKPEPAPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHARPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSS
SSSSSRSRSLPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKEP
SPRGRRRRSPSPPPTRRRRSPSPAPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPP
IQRRYSPSPPPKRRTASPPPPPKRRASPTPPPKRRVSHSPPPKQRSPPVAKRRSPSLSSK
HRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASASPQRRQSPSPSTR
PIRRVSRTPEPKKPKKAASPSPQSVRRVSSSRSVSGSPEPTVKKPPAPPSPVQSQSPSTN
WSPAVPIKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKTVAA
VAGAPATPAVVAAATATSVQEEPETAPEPKKETESEAEDNLDDLEKHLREKALRSMRKAQ
VSPQS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcggaacaggataatcggttcagcaacaaa
cagaagaaattattgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattccaaaatgatgcaaatcaacttgactggatttttgaatgggaaaaatgctagagaa
tttatgggagaactgtggcccctcttgttaagtgcacaagaaaacatcgctggaatccct
tctgctttcctagaactaaagaaagaagaaataaaacagagacagattgaacaggaaaaa
ttggcatctatgaagaagcaagatgaagacaaagataagagggataaagaagaaaaagaa
agcagcagagaaaagagggagagatcgcgaagccccaggagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgctccagaaaagaaggaaaaaact
ccagagcttccagaaccttcagtgaaaataaaagaaccttcagtacaagaggccacatct
actagtgacatcctgaaagttcccaagcctgaacctgcaccagagcctaaagaaccttct
ccagaaaaaaattccaaaaaagaaaaggaaaaggaaaagacccgaccaagatctcggtca
cgttctaaatcaaggtcccgaacacgctctcgctctccttcccatgctcgaccaagaagg
cgccatagatctcgatcaagatcgtattcacctagaaggcggcctagcccaaggaggcgg
ccatctcctcgaagaagaaccccaccaagacgaatgcctcctccccccaggcacaggagg
agtaggtctccagggagacgaagaaggcgctcatcagcatccttgtccgggagtagctca
tcatcctcttcatctcgctcccggtccctgccaaagaagcctcccaagaggacttccagc
ccccctcgaaaaactcgtaggttatctccttcagcaagtcctccaaggcgacgacacagg
ccatcgccccctgcaactccacctccaaaaactcgtcattccccaacaccccagcaatca
aatcgtacaagaaaaagtcgtgtttctgtgtctccagggagaacttcaggtaaagtgaca
aaacacaaaggtactgagaaaagagagtcaccttcaccagcaccaaagcctagaaaagta
gagttatctgaatcagaagaagataaaggtggcaagatggctgcagcagattctgtgcag
cagagacgccagtacaggcgacagaaccagcagtcttcatctgactctggctcctcctcc
tcttcagaagatgagcgacccaagagatcccatgtgaagaatggtgaggtaggcaggcgg
cggagacattccccttcccggagtgcctctccatcaccacgaaaacgccaaaaagagcct
tcccctcgtggtagacggaggagaagtccctccccaccaccaaccagaagacgacgctct
ccttctcctgctccccctcctcctcggcgccgcaggtctcccacaccgccaccaagacga
aggactccttctcctccaccacgtcggcgctcaccttccccaagaagatactctcctcca
atacagaggagatattctccttctccacctccaaagagaaggacggcctctcccccacct
cctcctaaacgaagagcttcaccaactccaccaccaaagcgccgggtttcccattctcca
cctcccaaacagagaagccccccagtcgccaagagacgctcaccatctttatcttcaaag
cataggaaagggtcttccccaagccgctctacccgggaggcccggtcaccacaaccaaac
aagcggcattcaccctcaccacgacctcgagctccccagacctcttcaagtcctccccct
gttcgaagaggagcatcggcatcaccccaaagaaggcagtccccatctccaagtactagg
cccattaggagagtctccaggactccggaacccaaaaagccaaaaaaggctgcctcacca
agcccacagtctgtaagaagggtttcatcctcccgatctgtctctggatctcctgagcca
acagttaaaaagcctccagcacctccatcgcctgtccagtctcagtcaccctctacaaac
tggtcaccagcggtaccaatcaaaaaggctaaaagcccaacaccaagcccatctccggcc
aggaattctgatcaagaaggaggcggcaagaaaaagaagaaaaagaaggacaagaaacac
aaaaaggataagaaacacaagaagcacaaaaaacacaagaaggaaaagactgtggctgca
gtggctggagctcctgccacccccgcagttgttgctgctgccacagccacgtcagtgcag
gaggagcccgagacagctcccgagcccaagaaggagactgagagtgaagctgaggacaac
cttgatgacttagaaaagcacctgcgagaaaaggccctgagatccatgcggaaggctcaa
gtgtccccacagtcttag
DBGET
integrated database retrieval system
