Castor canadensis (American beaver): 109681801
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Entry
109681801 CDS
T04791
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2-like
KO
K10595
E3 ubiquitin-protein ligase HERC2 [EC:
2.3.2.26
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109681801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccan04121
]
109681801
03036 Chromosome and associated proteins [BR:
ccan03036
]
109681801
03400 DNA repair and recombination proteins [BR:
ccan03400
]
109681801
Enzymes [BR:
ccan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109681801
Ubiquitin system [BR:
ccan04121
]
Ubiquitin ligases (E3)
HECT type E3
109681801
Chromosome and associated proteins [BR:
ccan03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
109681801
DNA repair and recombination proteins [BR:
ccan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
109681801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
RCC1_2
HECT
Cul7
ZZ
SH3_15
ANAPC10
UBA_7
Motif
Other DBs
NCBI-GeneID:
109681801
NCBI-ProteinID:
XP_020012280
UniProt:
A0A8B7U3M9
LinkDB
All DBs
Position
Unknown
AA seq
2456 aa
AA seq
DB search
MTASDTEPHYFFLRLPRIFSSAQAAALAVCQCLAVESTHPSSPGFEDCSSSEATTPVSVQ
HIRPARMKKRKQSPVPALPIVVQLMEMGFPRRNIEFALKSLTGASGNAASLPGVEALVGW
LLDHSDVQVTDLSDAETVSDEYSDEEVVEDVDDAAYSVATGAVVTESQTYKKRADFLSND
DYAVYVRENIQVGMMVRCCRTYEEVCEGDVGKVIKLDRDGLHDLNVQCDWQQKGGTYWVR
YIHVELIGYPPPSSSSHIKIGDKVRVKASVTTPKYKWGSVTHQSVGIVKAFSANGKDIIV
DFPQQSHWTGLLSEMELVPSIHPGVTCDGCQMFPINGSRFKMQNDDDYDFCMTCFKTRRK
HNTRHTFFGRINEPGQSAVFCGRSGKQLKRCHSSQPGMLLDSWSRMVKSLNVSSSVNQAS
RLIDGSEPCWQSSGSQGKHWIRLEIFPDVLVHRLKMIVDPADSSYMPSLVVVSGNEILNN
LIELKTININPTDTTVPLLNDCTEYHRYIEIAIKQCRSSGIDCKIHGLVLLGRIRAEEED
LAAVPFLASDNEEEEDDKGSSGSLIRKKTAGLESAATIRTKVFVWGLNDKDQLGGLKGSK
IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQI
TALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTK
RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG
SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLA
LTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVY
AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVL
FQTARDPLGASYLGVPSDGDSSATSNKISGLNNSKPNRPSLAKILLSLDGNLAKQQALSH
ILTALQIMYARDAVVGXLMPAGMLAPVECPSFSSSAPASDASAMGSPMNGEEGMLAADTE
DRLSPNPWQEKREIVSSEDAVTPSAVTPSAPSASSRPFIPVTDDPGAASIIAETMTKTKE
DVESQHKASGPEPQSLDEFTSLLITDDTRVVVDLLKLSVCNRAGDRGRDVLSAVLSGMGT
AYPQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPYTDDTSTSGTVKIPGAEGL
RVEFDRQCSTERRHDPLTVMDGVNRIISVRSGREWSDWSSELRIPGDELKWKFISDGSVN
GWGWRFTVYPIMPAAGPKDLLSDRCVLSCPSMDLVTCLLDFRLNLTSNRSIVPRLAASLA
ACAQLSALAASHRMWALQRLRRLLTTEFGQSININRLLGENEGETRALSFTGSALAALVK
GLPEALQRQFEYEDPIVRGGKQLLHSPFFKVLVALACDLELDTLPCCAETHKWAWFRRYC
MASRVAVALDKRTPLPRLFLDEVAKKIRELMADSENMDVLHESHDIFKREQDEQLVQWMN
RRPDDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF
AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG
EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG
RYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG
RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVR
RPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL
QGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHLQEIPIIALRNRLLLLHHISE
LFCPCIPMFDLEGSLDETGLGPSVGFDTLRGILISQGKEAAFRKVVQATMVRDRQHGPVV
ELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSPDSLLLPHRVWKVKFVGESVDDC
GGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLNPAARAPVHCSMFRFLGV
LLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVDKDFIPGLMYIRDNEATSEEFEA
MSLPFTVPSASGQDIQLSSKHTHITLDNRAEYVRLAISYRLHEFDEQVAAVREGMARVVP
VPLLSLFTGYELETMVCGSPDIPLHLLKSVATYKGIEPSASLIQWFWEVMESFSNTERSL
FLRFVWGRTRLPRTIADFRGRDFVIQVLDKYNPPDHFLPESYTCFFLLKLPRYSCKQVLE
EKLKYAIHFCKSIDTDDYARIALTGEPAADDSSDDSDNEDADSFASDSTQDYLTGH
NT seq
7371 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatcggacacagaaccacactattttttcctcagacttcccagaatcttctcg
tctgcccaggctgctgctttggctgtgtgtcagtgtttggctgtggagtccactcaccct
tcaagcccaggttttgaagactgcagctccagtgaggccacaacaccagtctccgtgcag
cacattcgccctgccaggatgaagaagcgtaaacagtcaccagttccagctctgcctatt
gtggtacagctcatggaaatgggatttcctagaagaaacatagagtttgctctgaagtca
ctcactggtgcttctgggaatgcggctagtctgccgggtgtggaggccttggttgggtgg
ctacttgaccactctgatgtccaggttacagatctctcggatgcagaaacagtgtctgat
gagtattcagatgaggaggtggtagaggatgtggatgatgcagcctactctgtggctact
ggtgctgttgtaacagagagtcagacttacaaaaaacgagcggatttcttgagtaatgat
gattatgctgtgtatgtgagagagaatattcaggtggggatgatggttagatgctgtcga
acatatgaagaagtgtgtgaaggcgatgtgggcaaagtcatcaaactagatcgagatgga
ttacatgacctcaatgtacagtgtgattggcagcagaaggggggtacttactgggttcgg
tatattcatgtggaacttataggctatcctccaccaagttcttcttctcacatcaagatt
ggtgataaagtacgggtgaaagcctctgttaccacaccaaaatataaatggggatctgtg
actcatcaaagtgtgggaattgtgaaagctttcagtgccaatgggaaagatatcattgta
gacttccctcagcaatctcactggaccgggttattgtcagaaatggaattggtgcctagt
attcatcctggggttacttgtgatggttgtcaaatgttccctatcaatggatcgagattc
aaaatgcagaatgatgatgactatgatttttgtatgacatgtttcaagaccagaagaaaa
cacaacaccaggcataccttctttggcagaataaatgaaccaggacagtctgcagtattt
tgtggccgttctggaaaacagctgaagcgttgtcatagcagtcagcctgggatgctgcta
gacagctggtcccgcatggtgaagagtctgaatgtgtcatcttcagtgaaccaggcttct
cgtctgattgatggcagtgagccctgctggcaatcatctgggtcacaaggaaagcattgg
attcgtttggagattttcccagatgttcttgttcatagattgaaaatgatagtagatcct
gctgacagtagctacatgccttccctggttgtagtgtcaggtaatgaaattctaaacaac
ctaattgaactaaagacaatcaatatcaaccccactgacactacagtaccccttctgaat
gactgcacagagtatcacaggtacattgaaattgcaataaagcagtgcagaagctcagga
attgattgtaagatccatggcctcgttctcctgggtcggatcagggcagaggaggaagat
ctggctgcagttcctttcctggcttcagataatgaagaagaggaagatgacaagggcagc
agtggaagccttattagaaagaagactgcagggctagaatcagcagctacaatcagaacc
aaagtgttcgtgtggggcctgaatgataaggaccagctgggtgggctcaaaggctctaag
ataaaggtcccttcattctctgagactctgtctgctttgaatgtggtacaggtggctggt
ggttctaaaagtttgtttgcagtgactgtggaaggaaaggtgtatgcttgtggagaagcc
acgaatggccggctggggctgggcatgtctagtgggacagtccccatcccacggcagatc
actgccctcagcagctatgtggtcaagaaggtggcagttcactcaggtggacggcatgct
acggccttaactgtggatgggaaagtgttttcatggggtgaaggtgatgatggaaagctt
ggacacttcagcagaatgaactgtgacaagccaaggctgatagaggccctgaaaaccaag
cgcatccgggacattgcttgtgggagctcacacagtgcagccctcacatcgagcggggaa
ctgtacacatggggccttggagagtatggccggttgggacatggggataatacgactcag
ttgaagcccaaaatggtaaaagtccttcttggccacagagtaatccaggttgcgtgtgga
agcagagatgcacagacattggctctgactgatgaaggtttggtattttcctggggtgat
ggtgactttggaaaattgggccggggaggaagtgaaggctgtaacattcctcagaacatt
gagagattaaatggccagggagtatgccagatcgagtgtggagctcagttctctttggca
cttaccaagtcaggagtggtgtggacatggggaaaaggagattacttcaggctgggccat
ggctctgatgtgcatgtgcggaagccacaagtggtggaagggctgagggggaagaagatc
gtgcatgtggctgttggggctctacattgcctggcagtcacagactcagggcaggtatat
gcttggggtgataatgaccatggccagcagggcaatggcacaaccacagtaaacagaaag
cccactcttgtacaagggttggaaggccagaagatcacacgggtggcttgcgggtcatcg
cacagtgtggcctggacgacagtggatgtggccacaccttccgtccatgagcccgtcctc
ttccagactgcgagagaccctttgggtgcctcttatttaggtgtgccttcagatggtgat
tcttctgctaccagtaacaaaattagtggtttaaataattctaagccaaatcgcccttct
cttgcaaagattcttctgtcattggatggaaatctggccaaacagcaggccttatcacat
atcctgacagcactgcaaatcatgtatgccagagatgcagtggtcgggngcctgatgcca
gctggcatgctcgccccggtggagtgcccttcattctcctcctcagcacctgcttctgat
gcatctgccatgggcagtcccatgaatggagaggaaggcatgctggctgctgatactgag
gatagactgagtccaaatccatggcaagagaagagagagattgtctcctccgaggatgct
gtgaccccctctgcagtgaccccgtctgcaccatcagcctcctctcggccatttatccca
gtgacagatgacccaggagctgccagcatcattgcagaaaccatgactaaaaccaaagag
gatgttgaaagccaacataaagcatcaggcccagagcctcagtccttggatgagtttact
agtctgctgatcacagatgacacccgtgtggtagtggacttgcttaagctgtcagtatgc
aaccgggctggagacaggggccgggacgtactctcagctgtgctgtctggcatgggcact
gcctatccccaggtggcagatatgttgttggagctgtgtgttactgagttggaagatgta
gccacagactcgcagagcggccgtctttcctcgcagcctgtagtggtggagagcagccat
ccctacacggacgatacttctaccagtggcacggtgaagataccaggtgcagaaggactc
agggtggaatttgacaggcagtgctccacagagaggcgccatgatcctctcacagtcatg
gatggtgtcaacaggattatatctgtacggtcaggccgagaatggtctgactggtccagt
gagctgcgcatccctggggatgagctgaagtggaagttcatcagtgacggatctgtgaat
ggttggggctggcgctttacagtctatcccatcatgccagctgcaggccctaaggactta
ctctccgatcgctgtgtcctctcttgtccatcaatggatttggtgacgtgtctccttgat
ttccgactcaatctcacctccaacagaagcattgtccctcgccttgcagcctctctggct
gcatgtgcacagctgagtgccttagctgccagccacagaatgtgggctcttcagagactg
aggaggctgctcaccacggaatttgggcagtcaattaacataaacaggctactgggagaa
aatgagggggaaacgagagctttgagttttacaggtagtgctcttgctgctttggtgaaa
ggtcttccagaagctttgcaaaggcaatttgagtatgaagatcctattgtgagaggtggc
aaacagctgcttcacagccctttctttaaggtactagtagctcttgcttgtgacctggaa
ctcgacactctcccttgctgtgctgagacgcacaagtgggcttggttccgacggtactgc
atggcttcccgtgttgctgtggctctggacaaaagaacaccattaccccgtctgtttctt
gatgaggtggctaagaaaattcgtgaattaatggcagacagcgaaaatatggatgttctc
catgagagccatgacatttttaagagagagcaagatgaacaacttgtgcagtggatgaac
aggcgaccagatgattggactctttctgctggtggcagcggaaccatttatggatggggg
cataatcacagggggcagcttgggggtattgaaggtgcaaaagttaaagttcctactcca
tgtgaagctcttgcaactctcagaccagtgcagttaattggaggagaacagacacttttt
gctgtgactgccgatgggaagctgtatgccactggctatggtgctggtggcagactaggg
attggtgggacagagtcagtatctaccccaactttgctggagtccattcagcatgtattc
attaagaaggtggctgtgaactcaggaggaaaacactgccttgccctctcttcagaagga
gaagtttattcttggggtgaggcagaagatgggaaattggggcatggcaacagaagtcca
tgtgaccgtcctcgtgtcattgagtctctgagaggaatcgaggtggttgatgttgctgct
ggtggtgcccacagtgcatgtgtcacagcagctggagacctctacacatggggcaaaggc
cggtatggccgcctggggcacagtgacagtgaggaccagttaaagccaaagctggtggaa
gttctgcagggccaccgtgtagtagacattgcctgtggcagtggtgatgcccagactctc
tgcctcactgatgacgacactgtctggtcctggggggacggggactatggcaagcttggc
agaggaggcagtgatggctgcaaagtgcccatgaagattgattctctcactggccttgga
gtagttaaagtagagtgtggatctcagttttctgttgcccttaccaaatctggagctgtt
tatacatggggcaaaggtgactatcacaggctgggccatggatctgatgaccatgttcgg
agacctcggcaggtccaagggctgcaggggaagaaagtcattgccattgccactggctcc
ttgcattgtgtatgctgcacagaggatggtgaagtttatacatggggtgacaatgatgag
ggacaactaggagatggaacaacaaatgccattcaaaggcctcggttagtagctgccctt
cagggtaagaaggtcaaccgtgtggcctgtggctcagcacacacccttgcctggtcgacc
agcaagccagctagtgctggcaagcttcctgcacaggtccccatggagtacaatcatttg
caggagatcccaataatcgccctgaggaaccgacttctgctgctgcatcatatctcagag
ctcttctgcccctgcatccccatgtttgacttggagggctctctggacgaaactgggctt
gggccttctgttgggtttgacacactacgagggatcctgatatcccagggaaaggaggca
gctttccgaaaagtagtgcaagcaactatggtgcgagatcgtcaacatggtcctgttgtg
gagctgaaccggattcaggtcaagcgctccaggagtaaaggcgggttagcgggccctgat
ggcactaagtctgtctttggacagatgtgtgctaagatgagctcctttagtcctgacagc
ctcctcctccctcaccgtgtgtggaaagtcaagtttgtaggtgaatctgttgatgactgt
gggggtggctacagcgaatccatagctgagatctgtgaagagctgcagaacggactcact
ccccttctgatcgtgacacccaatgggagagatgagtctggggctaacagagactgctac
ctgttgaacccagctgccagggcacctgtgcactgcagcatgttccgcttcttaggagtg
ttactgggcattgccattcgaactgggagtcccttgagccttaacctggctgagcctgtg
tggaagcagttggctgggatgagcctcaccattgcagacctcagtgaggttgataaagac
tttattcctgggctcatgtatatccgtgacaatgaagccacctcagaggagtttgaggcc
atgagcttgccctttacagtgccaagtgctagtggccaggacatccagctgagctccaaa
cacacacacatcaccctggacaaccgtgcagagtatgtccgactggcaataagttacaga
ctccatgaatttgatgagcaggtggctgctgttcgggaagggatggcccgagtagtgcct
gtcccccttctttctctgttcactggatatgaactggagacgatggtatgtggcagccca
gatatcccactgcatcttctgaagtcggtggcaacctataaaggaatcgaaccctctgcc
tccttaatccagtggttctgggaggtgatggagtctttctccaacacagagcgctccctc
ttccttcgctttgtgtggggccggacaagattacccaggaccattgctgatttccggggt
agagactttgtcatccaggtgctggacaaatacaaccctcctgaccacttccttcctgaa
tcctacacttgtttctttttgctgaagttgcccaggtattcctgtaaacaggtgcttgag
gagaagctgaaatatgccatccacttttgcaaatccatagacacagatgattatgctcgc
atagcccttacaggagaaccagctgctgatgacagcagtgatgactcggataacgaggat
gcagattcatttgcttcagattctacacaagattatctaacaggacactaa
DBGET
integrated database retrieval system
