Castor canadensis (American beaver): 109681915
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Entry
109681915 CDS
T04791
Symbol
Arid1b
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03082
ATP-dependent chromatin remodeling
ccan04714
Thermogenesis
ccan05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109681915 (Arid1b)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
109681915 (Arid1b)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
109681915 (Arid1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccan03000
]
109681915 (Arid1b)
03021 Transcription machinery [BR:
ccan03021
]
109681915 (Arid1b)
03036 Chromosome and associated proteins [BR:
ccan03036
]
109681915 (Arid1b)
Transcription factors [BR:
ccan03000
]
Eukaryotic type
Helix-turn-helix
ARID
109681915 (Arid1b)
Transcription machinery [BR:
ccan03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109681915 (Arid1b)
Chromosome and associated proteins [BR:
ccan03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109681915 (Arid1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
109681915
NCBI-ProteinID:
XP_020012465
UniProt:
A0A8C0XT89
LinkDB
All DBs
Position
Unknown
AA seq
1538 aa
AA seq
DB search
MPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMSQYGTQQTGPSMSPHPSPGGQ
MHPGMSSFQQSNSSGTYGPQMSQYGPQGNYSRTPTYSGVPGASYSSPGPGMGINANNQMH
GQGPSQPCGAMPLGRMPSAGMQNRPFPGSMSSVTPSSPGMSQQGGPGMGPPMPTVNRKAQ
EAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSNLMSTQVPPYSMAPTM
VNSSTASMGLADMMSPGESKLPMPLKADGKEEGTPQLESKSKDSYSSQGISQPPTPGNLP
VPSPMSPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERK
LWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLN
VGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANSGSLQ
GPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTISVHDPFSDVSDSSFPK
RNSMTPNTPYQQGMGMPDMMGRMPYEPNKDPFGGMRKVPGSTEPFMTQGQMPNSSMQDMY
NQTPSGALSNLGMGQRQQFPYGASYERRHEPYGQQYPGQGPPTGQPPYGGHQPGLYPQQP
NYKRHMDGVYGPPAKRHEGDMFNMQYGSQQQDMYNQYGSSYAGPDRRPIQGQYPYPYNRE
RMQGAGQMPPHGIPPQMMAGPMQSSSSEGPQQNMWAARNDMPYPYQNRQGPGGPAQAPPY
PGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPITRPPQSSYQTPPSLPNHI
SRAPSPASFQRSLENRMSPSKSPFLPAMKMQKVMPTVPTSQVTGPPPQPPPIRREVTFPP
GSVEASQPVLKQRRKMTSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVAT
FNLSQLSGFLELLVEYFRKCLIDIFGILTEYEVGDPSQKALDRRAGRRDDSQSSTDDSGN
EEDDAECLDEDEDEDDEDEDGDKTELEAKSCTAVPTADATADPKEKPKQASKFDKLPIKI
VKKNNLFVVDRSDKLGRVQEFSSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLS
STGRKKEPEGRGGSEEQPEKSIVATIDDVLSARPGALPEDANPGPQAESGKLPFGIQQAK
SHRNIKLLEDEPRSRDETPLCTTAHWQDSLARRCICVSNIVRSLSFVPGNDAEMSKHPGL
VLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANI
SGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSI
QDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAV
QKGSIGNLISFLEDGVTMAQYQQSQHNLMHAQAPPLEPPSVDMMCRAAKALLAMARVDEN
RSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgccacctcaaccacctgggagccagtcagaatccagttcccaccctgccttgagccag
tcaccaatgccacaggaaagaggttttatggcaggcacacaaagaaatcctcagatgtct
cagtatggaactcaacagacaggaccatccatgtcaccccatccttctcctgggggccag
atgcatcctggaatgagtagctttcagcagagtaactcaagtggcacttacggtccacag
atgagccagtatggaccccaaggtaactactccagaactccaacatatagtggggtgcct
ggtgcaagctacagcagcccagggcccggtatgggtatcaatgccaacaaccagatgcat
ggacaagggccaagccagccatgtggtgctatgcccctgggacgaatgccatcagctggg
atgcagaacagaccgtttcctggaagtatgagcagcgtgacgcccagttctcctggcatg
tctcagcagggggggccaggaatggggccaccaatgcccactgtgaaccgtaaggcccag
gaggctgctgcagccgtgatgcaggctgccgcaaattcagcacaaagcaggcaaggcagt
tttcctggcatgaaccagagtggactcatggcttccagttctccctacagccagcccatg
aacaacagctccaacctgatgagcacacaggtgccaccctacagcatggcacccaccatg
gtgaacagctctacagcatctatgggtcttgcagatatgatgtctcctggtgaatccaaa
ctacccatgcctctcaaagcagacggcaaagaagaaggcactccacagctcgagagcaag
tcaaaggatagctacagctctcagggtatatctcagcccccaaccccaggcaacctgcca
gtcccttccccaatgtcccccagctctgctagcatctcctcctttcatggagatgagagt
gatagcattagcagcccaggctggccaaagactccatcaagccctaagtccagctcgtcc
accactactggggagaagatcacaaaggtgtatgagctggggaacgagccagagaggaag
ctgtgggttgatcgatacttgacttttatggaagagaggggatcccctgtctctagtctg
cctgcagtgggcaagaagccgctggacctgttccgactgtatgtctgcgtcaaggagatt
ggaggtttggcccaggtcaataaaaacaagaagtggcgtgagctggcaaccaacctaaat
gttggcacttcaagcagcgcagcaagctccctgaaaaagcagtatattcagtacctgttt
gcctttgagtgcaagatcgaacgaggggaggagcccccgccggaagtcttcagcactggg
gacacgaagaagcaacccaagctccagccgccatctcctgctaactcaggatccttgcaa
ggtccacagaccccccagtcaactggcagcaattccatggcagaagttccaggtgacctg
aagccacctaccccagcctccactcctcatggacagatgactccgatgcaaggtggaaga
agcagtacaatcagtgtgcatgacccattctcagacgtgagtgattcatctttcccaaaa
cggaactccatgactccaaacaccccataccagcagggcatgggcatgccagacatgatg
ggcaggatgccctatgaacccaacaaggacccctttggtggaatgagaaaagtgcctgga
agtactgagccttttatgactcaaggacagatgcccaacagcagcatgcaggacatgtat
aaccagactccctcaggggcattgtccaatctgggcatgggacagcggcagcagtttccc
tatggggccagttatgagcgaaggcatgagccttatgggcagcagtatccaggccaaggt
cctcccacaggacagccgccgtatggaggccaccagcctggcctgtacccgcagcagccg
aattacaagcgccatatggatggcgtgtacggacctccagctaaacgccacgagggggac
atgttcaacatgcagtatggcagccagcagcaagacatgtataaccagtacgggagctct
tacgccggcccagaccggaggcccatccaggggcagtatccgtacccctacaacagagag
aggatgcagggtgccggccagatgccaccacatggaatcccaccccagatgatggctggc
ccaatgcagtcatcctccagcgaagggccgcagcagaatatgtgggccgcacgcaatgat
atgccttatccctaccagaacaggcagggcccaggcggccctgcacaggcacccccttat
ccaggcatgaaccgcacggacgatatgatggtacctgatcaaaggatcaatcatgagagc
cagtggccttcccatgtcagccagcgccagccttacatgtcgtcttcagcctccatgcag
cccatcacacgcccacctcagtcatcctatcagactccaccatcactgccaaaccacatc
tccagggcacccagtccagcttccttccagcgctccctggagaaccgcatgtctccaagc
aagtctccctttctgcctgcaatgaagatgcagaaggtcatgcccacggtccccacatcc
caggtcactgggccaccaccccagccacctccaatcagaagggaggttacctttccccct
ggttccgtggaagcatcacaaccggtcctgaagcaaaggcgaaagatgacctcaaaagac
attgttactcctgaggcatggcgtgtgatgatgtcccttaagtcaggtctgctggctgaa
agtacttgggctttggacactatcaacattcttctgtatgacgacagcactgttgctact
ttcaatctctcccagttgtctggatttctcgaacttttagtagagtactttcgaaaatgc
ctgattgacatttttggaattcttacggaatatgaagtgggtgaccccagccaaaaagca
cttgaccgccgtgcagggaggagagatgacagccagtcttccaccgacgattctgggaac
gaggaagatgatgctgaatgtcttgatgaggacgaggatgaggacgacgaggatgaagat
ggcgacaagacagaactggaggcgaagagctgcactgctgtccccactgcggatgctact
gcagaccccaaggagaagcccaagcaggccagtaagtttgacaagctgcccataaagatc
gtcaaaaagaacaacctgttcgtggtggacaggtctgacaagctgggccgtgtgcaggag
ttcagcagcgggcttctgcactggcagctcgggggcggcgacaccacagagcacatccag
actcacttcgagagcaagatggaaatcccgcctcgcagacgcccgcctccccctttaagc
tccacgggtagaaagaaagagccagaaggcagaggtggttctgaagagcagccagagaaa
agcatagtggccaccatcgatgacgtcctgtctgctcggccaggggccctgccggaagat
gcaaaccccgggcctcaggccgaaagcggcaagctccccttcggtatacagcaagccaaa
agtcacaggaacatcaagctgctggaggacgagcccaggagccgcgacgagactcccctg
tgcaccaccgcgcactggcaggactcgctggcccggcgctgcatctgtgtctccaacatc
gtgcggagcttgtctttcgtgcctggcaacgacgccgagatgtccaaacatccaggcttg
gtgctgatcttggggaagctgattcttcttcaccacgagcatccagagcggaaacgagcg
ccacagacctatgagaaggaggaggacgaggacaagggggtggcctgcagcaaagatgag
tggtggtgggactgcctcgaagtcttgcgggataacacactggtcacgttggccaacatc
tctgggcagctagacttgtctgcgtacacggaaagcatctgcttgcccattctggatggc
ttgctgcactggatggtgtgcccatctgcggaggcacaagacccctttcccacggtggga
cccaactcggtcctgtcgccacagagactcgtgctggagaccctctgtaaactcagtatc
caggacaacaacgtggacctgatcttagccacacctccgtttagtcgtcaggagaaattc
tatgccacgttagttaggtacgttggggatcgtaaaaacccagtctgtcgagaaatgtcc
atggcgcttttatcgaaccttgcccagggggacgcgctggcagcaagggcaatagctgtg
cagaagggaagcatcgggaacttgataagcttcctagaggacggggtcacgatggcgcag
taccagcagagccagcacaacctcatgcacgcgcaagccccgcctctggagccgccaagc
gtggacatgatgtgcagggcggccaaggctctgctggccatggccagagtggacgagaac
cgctcggagttcctcttgcacgagggccggttgctggatatctccatatcagctgtcctg
aactccctggttgcgtctgtcatctgtgacgtactgtttcagattgggcagttatga
DBGET
integrated database retrieval system
